CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si027380m.g
(
Setaria italica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Si027380m.g
T021322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si027380m
B3
1
77
KIPTAFHQHLKEQPTGLVSLKGPSGNTWQAVLTSDSEGLFFEQGWKEFVTDHSVKQGHFLVFTYDGLSRFSVTVFGS
Si027380m
B3
247
342
AVQTMMESYVYVGFFMNITCEFVRESLPRISKKMTLWDPLGKPWQVNYVYYSDRSVASFSGGWGKFALGNNLEKFDVCVFELFKEDNIKVHIYRVV
Links
Other
B3
family TFs
Other
Setaria italica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ha01581
Panicum virgatum
Pavir.Ha01581
N
0.948
Sb05g006090
Sorghum bicolor
Sb05g006090
N
0.809
OPUNC11G05820
Oryza punctata
OPUNC11G05820
N
0.746
BGIOSGA034352
Oryza indica
BGIOSGA034352
N
0.740
OBART11G05830
Oryza barthii
OBART11G05830
N
0.740
OGLUM09G19780
Oryza glumaepatula
OGLUM09G19780
N
0.740
OLONG_000013
Oryza longistaminata
OLONG_000013
N
0.740
OMERI11G04690
Oryza meridionalis
OMERI11G04690
N
0.740
ONIVA11G16350
Oryza nivara
ONIVA11G16350
N
0.740
ORGLA11G0053000
Oryza glaberrima
ORGLA11G0053000
N
0.740
ORUFI11G05730
Oryza rufipogon
ORUFI11G05730
N
0.740
OS11G0197600
Oryza sativa
OS11G0197600
N
0.734
GRMZM2G001048
Zea mays
GRMZM2G001048
N
0.723