CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM09G19780
(
Oryza glumaepatula
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OGLUM09G19780
T020114_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM09G19780.1
B3
32
123
FFRVLLTLQSLERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKWSQFSVTVFEPS
OGLUM09G19780.1
B3
296
391
AVQIMMESYVYVGFFMNIPCEFVRECLPRTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNIKVHIYRVV
OGLUM09G19780.2
B3
7
93
SEWKEEERKKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKWSQFSVTVFEPS
OGLUM09G19780.2
B3
266
361
AVQIMMESYVYVGFFMNIPCEFVRECLPRTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNIKVHIYRVV
OGLUM09G19780.3
B3
32
123
FFRVLLTLQSLERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKWSQFSVTVFEPS
OGLUM09G19780.3
B3
296
391
AVQIMMESYVYVGFFMNIPCEFVRECLPRTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNIKVHIYRVV
Links
Other
B3
family TFs
Other
Oryza glumaepatula
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034352
Oryza indica
BGIOSGA034352
N
0.995
OBART11G05830
Oryza barthii
OBART11G05830
N
0.995
OLONG_000013
Oryza longistaminata
OLONG_000013
N
0.995
OMERI11G04690
Oryza meridionalis
OMERI11G04690
N
0.995
ONIVA11G16350
Oryza nivara
ONIVA11G16350
N
0.995
ORUFI11G05730
Oryza rufipogon
ORUFI11G05730
N
0.995
OS11G0197600
Oryza sativa
OS11G0197600
N
0.989
OPUNC11G05820
Oryza punctata
OPUNC11G05820
N
0.955
ORGLA11G0053000
Oryza glaberrima
ORGLA11G0053000
N
0.951
OPUNC11G05830
Oryza punctata
OPUNC11G05830
N
0.899
OB11G14640
Oryza brachyantha
OB11G14640
N
0.883
LPERR11G05260
Leersia perrieri
LPERR11G05260
N
0.770
Si027380m.g
Setaria italica
Si027380m.g
N
0.740
Pavir.Ha01581
Panicum virgatum
Pavir.Ha01581
N
0.722
Sb05g006090
Sorghum bicolor
Sb05g006090
N
0.718