Aan_R008287 (Calypte anna)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aan_R008287 T132601_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.825 0.993
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.825 0.993
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R008287 C2H2 ZF 145 167
Aan_R008287 C2H2 ZF 209 230
Aan_R008287 C2H2 ZF 236 258
Aan_R008287 C2H2 ZF 266 289
Aan_R008287 C2H2 ZF 295 317
Aan_R008287 C2H2 ZF 349 371

Links

Other C2H2 ZF family TFs
Other Calypte anna TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB42 Homo sapiens ENSG00000179627 D
ENSPSIG00000000487 Pelodiscus sinensis ENSPSIG00000000487 I
znf238.2 Xenopus tropicalis XB-GENE-1219066 I
Pvit_02527 Pogona vitticeps Pvit_02527 I
Gfo_R006792 Geospiza fortis Gfo_R006792 I
ENSP00000409107 Macaca fascicularis ENSP00000409107 I
Cmyd_10012301 Chelonia mydas Cmyd_10012301 I
Brh_R011012 Buceros rhinoceros Brh_R011012 I
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I
Afo_R004692 Aptenodytes forsteri Afo_R004692 I
Aan_R011644 Calypte anna Aan_R011644 I
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I
zbtb42 Takifugu rubripes ENSTRUG00000013592 I
zbtb42 Tetraodon nigroviridis ENSTNIG00000000917 I
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I
ZBTB42 Pan troglodytes ENSPTRG00000040287 I
ZBTB42 Anolis carolinensis ENSACAG00000011451 I
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I
zbtb42 Oryzias latipes ENSORLG00000017008 I
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I
ZBTB42 Monodelphis domestica ENSMODG00000013701 I
ZBTB42 Meleagris gallopavo ENSMGAG00000015389 I
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I
ZBTB42 Gallus gallus ENSGALG00000023025 I
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I
ENSFALG00000014898 Ficedula albicollis ENSFALG00000014898 I
zbtb42 Danio rerio ENSDARG00000102761 I
ENSCSAG00000019588 Chlorocebus sabaeus ENSCSAG00000019588 I
ENSAMEG00000007755 Ailuropoda melanoleuca ENSAMEG00000007755 I