Pvit_02527 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_02527 T136903_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB42
M08351_2.00 		Homo sapiens
MRCAKCTGS
SCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE 		0.776 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_02527 C2H2 ZF 349 371
Pvit_02527 C2H2 ZF 390 411
Pvit_02527 C2H2 ZF 417 439
Pvit_02527 C2H2 ZF 447 468

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB42 Anolis carolinensis ENSACAG00000011451 I 0.811
ZBTB42 Gallus gallus ENSGALG00000023025 I 0.800
ZBTB42 Meleagris gallopavo ENSMGAG00000015389 I 0.800
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I 0.800
Ogr11588 Ophisaurus gracilis Ogr11588 I 0.797
zbtb42 Oryzias latipes ENSORLG00000017008 I 0.795
zbtb42 Tetraodon nigroviridis ENSTNIG00000000917 I 0.795
zbtb42 Takifugu rubripes ENSTRUG00000013592 I 0.795
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I 0.795
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I 0.795
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I 0.792
zbtb42 Danio rerio ENSDARG00000102761 I 0.791
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I 0.790
znf238.2 Xenopus tropicalis XB-GENE-1219066 I 0.785
ZBTB42 Monodelphis domestica ENSMODG00000013701 I 0.785
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I 0.785
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I 0.783
ENSCSAG00000019588 Chlorocebus sabaeus ENSCSAG00000019588 I 0.776
ZBTB42 Pan troglodytes ENSPTRG00000040287 I 0.776
ENSP00000409107 Macaca fascicularis ENSP00000409107 I 0.776
ZBTB42 Homo sapiens ENSG00000179627 D 0.776
ENSAMEG00000007755 Ailuropoda melanoleuca ENSAMEG00000007755 I 0.772