Ogr11588 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr11588 T136666_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB42
M08351_2.00 		Homo sapiens
MRCAKCTGS
SCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE 		0.772 0.888
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr11588 C2H2 ZF 349 371
Ogr11588 C2H2 ZF 390 411
Ogr11588 C2H2 ZF 417 439
Ogr11588 C2H2 ZF 447 468

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB42 Gallus gallus ENSGALG00000023025 I 0.824
ZBTB42 Meleagris gallopavo ENSMGAG00000015389 I 0.824
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I 0.824
ZBTB42 Anolis carolinensis ENSACAG00000011451 I 0.812
ZBTB42 Monodelphis domestica ENSMODG00000013701 I 0.809
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I 0.809
znf238.2 Xenopus tropicalis XB-GENE-1219066 I 0.809
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I 0.797
zbtb42 Oryzias latipes ENSORLG00000017008 I 0.797
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I 0.797
zbtb42 Tetraodon nigroviridis ENSTNIG00000000917 I 0.797
zbtb42 Takifugu rubripes ENSTRUG00000013592 I 0.797
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I 0.797
Pvit_02527 Pogona vitticeps Pvit_02527 I 0.797
zbtb42 Danio rerio ENSDARG00000102761 I 0.794
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I 0.794
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I 0.792
ENSCSAG00000019588 Chlorocebus sabaeus ENSCSAG00000019588 I 0.772
ZBTB42 Homo sapiens ENSG00000179627 D 0.772
ZBTB42 Pan troglodytes ENSPTRG00000040287 I 0.772
ENSP00000409107 Macaca fascicularis ENSP00000409107 I 0.772
ENSFALG00000014898 Ficedula albicollis ENSFALG00000014898 I 0.769
Aan_R011644 Calypte anna Aan_R011644 I 0.769
Afo_R004692 Aptenodytes forsteri Afo_R004692 I 0.769
Brh_R011012 Buceros rhinoceros Brh_R011012 I 0.769
Gfo_R006792 Geospiza fortis Gfo_R006792 I 0.769
ENSPSIG00000000487 Pelodiscus sinensis ENSPSIG00000000487 I 0.766
Cmyd_10012301 Chelonia mydas Cmyd_10012301 I 0.766
ENSAMEG00000007755 Ailuropoda melanoleuca ENSAMEG00000007755 I 0.760