Alligator_sinensis_CCG009080.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG009080.1 T133240_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG009080.1 C2H2 ZF 259 280
Alligator_sinensis_CCG009080.1 C2H2 ZF 306 329
Alligator_sinensis_CCG009080.1 C2H2 ZF 335 357

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARNTL Homo sapiens ENSG00000133794 D
Arntl Rattus norvegicus ENSRNOG00000014448 D
Arntl Mus musculus ENSMUSG00000055116 D
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I
ARNTL Vicugna pacos ENSVPAG00000005926 I
ARNTL Tursiops truncatus ENSTTRG00000013925 I
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I
arntl1a Takifugu rubripes ENSTRUG00000008391 I
arntl2 Takifugu rubripes ENSTRUG00000007832 I
arntl2 Tetraodon nigroviridis ENSTNIG00000012142 I
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I
ARNTL Tupaia belangeri ENSTBEG00000017387 I
ENSXMAG00000001482 Xiphophorus maculatus ENSXMAG00000001482 I
ARNTL Sus scrofa ENSSSCG00000013397 I
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I
ARNTL Pteropus vampyrus ENSPVAG00000006712 I
ARNTL Pan troglodytes ENSPTRG00000003376 I
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I
ENSPMAG00000004171 Petromyzon marinus ENSPMAG00000004171 I
ENSPFOG00000016287 Poecilia formosa ENSPFOG00000016287 I
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I
Gfo_R013617 Geospiza fortis Gfo_R013617 I
arntl.S Xenopus laevis XB-GENE-495459 I
arntl Xenopus tropicalis XB-GENE-495455 I
arntl.L Xenopus laevis XB-GENE-17342306 I
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I
Tal_R003521 Tyto alba Tal_R003521 I
Pvit_10294 Pogona vitticeps Pvit_10294 I
Ogr18318 Ophisaurus gracilis Ogr18318 I
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I
arntl2 Oryzias latipes ENSORLG00000010946 I
ENSP00000384517 Macaca fascicularis ENSP00000384517 I
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I
Brh_R010633 Buceros rhinoceros Brh_R010633 I
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I
Afo_R014608 Aptenodytes forsteri Afo_R014608 I
Aan_R006598 Calypte anna Aan_R006598 I
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I
ARNTL Cavia porcellus ENSCPOG00000008795 I
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I
ARNTL Felis catus ENSFCAG00000010983 I
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I
ARNTL Equus caballus ENSECAG00000012118 I
Arntl Dipodomys ordii ENSDORG00000015539 I
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I
arntl2 Danio rerio ENSDARG00000041381 I
arntl1b Danio rerio ENSDARG00000035732 I
arntl1a Danio rerio ENSDARG00000006791 I
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I
ARNTL Gallus gallus ENSGALG00000005378 I
ARNTL Callithrix jacchus ENSCJAG00000010162 I
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I
ARNTL Canis familiaris ENSCAFG00000008095 I
ARNTL Bos taurus ENSBTAG00000013029 I
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I
ENSAMXG00000020233 Astyanax mexicanus ENSAMXG00000020233 I
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I
ENSAMXG00000010089 Astyanax mexicanus ENSAMXG00000010089 I
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I
ARNTL Anolis carolinensis ENSACAG00000004497 I
ARNTL Monodelphis domestica ENSMODG00000008708 I
CGI_10025278 Crassostrea gigas CGI_10025278 I
ARNTL Ochotona princeps ENSOPRG00000004853 I
ENSONIG00000014665 Oreochromis niloticus ENSONIG00000014665 I
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I
ARNTL Otolemur garnettii ENSOGAG00000000736 I
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I
arntl1a Oryzias latipes ENSORLG00000019370 I
ARNTL Macaca mulatta ENSMMUG00000009690 I
ARNTL Myotis lucifugus ENSMLUG00000008503 I
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I
ARNTL Meleagris gallopavo ENSMGAG00000005349 I
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I
ARNTL Loxodonta africana ENSLAFG00000026673 I
ENSLACG00000004629 Latimeria chalumnae ENSLACG00000004629 I
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I
ARNTL Gorilla gorilla ENSGGOG00000013211 I