CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Afo_R014608
(
Aptenodytes forsteri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Afo_R014608
T046609_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arntl
M01751_2.00
Mus musculus
NCACGTGAYN
NRTCACGTGN
PBM
Weirauch et al.(2014)
pTH5064
0.914
0.981
ARNTL
M02787_2.00
Homo sapiens
GTCACGTGAC
GTCACGTGAC
SELEX
Jolma et al.(2013)
ARNTL_1
0.914
0.981
ARNTL
M04124_2.00
Homo sapiens
RDCACGTGHN
NDCACGTGHY
SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX
0.914
0.981
ARNTL
M08725_2.00
Homo sapiens
NVDCACGTGBN
NVCACGTGHBN
Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A
0.914
0.981
Arntl
M08776_2.00
Mus musculus
VCACGTGMN
NKCACGTGB
Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A
0.914
0.981
Arntl
M09478_2.00
Mus musculus
CACGTGNN
NNCACGTG
Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860
0.914
0.981
Arntl
M09889_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BMAL1_01
0.914
0.981
ARNTL
M09841_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BMAL1_Q6
0.914
0.981
ARNTL
M04125_2.00
Homo sapiens
NDCACRTGHY
RDCAYGTGHN
SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R014608
bHLH
73
126
AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHLKTLR
Links
Other
bHLH
family TFs
Other
Aptenodytes forsteri
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARNTL
Anolis carolinensis
ENSACAG00000004497
I
0.914
ENSAMEG00000002309
Ailuropoda melanoleuca
ENSAMEG00000002309
I
0.914
ENSAPLG00000003885
Anas platyrhynchos
ENSAPLG00000003885
I
0.914
ARNTL
Bos taurus
ENSBTAG00000013029
I
0.914
ARNTL
Canis familiaris
ENSCAFG00000008095
I
0.914
ARNTL
Choloepus hoffmanni
ENSCHOG00000000376
I
0.914
ARNTL
Callithrix jacchus
ENSCJAG00000010162
I
0.914
ARNTL
Cavia porcellus
ENSCPOG00000008795
I
0.914
ENSCSAG00000004681
Chlorocebus sabaeus
ENSCSAG00000004681
I
0.914
arntl1a
Danio rerio
ENSDARG00000006791
I
0.914
arntl1b
Danio rerio
ENSDARG00000035732
I
0.914
ARNTL
Dasypus novemcinctus
ENSDNOG00000003841
I
0.914
Arntl
Dipodomys ordii
ENSDORG00000015539
I
0.914
ARNTL
Equus caballus
ENSECAG00000012118
I
0.914
ENSFALG00000010646
Ficedula albicollis
ENSFALG00000010646
I
0.914
ARNTL
Felis catus
ENSFCAG00000010983
I
0.914
ARNTL
Homo sapiens
ENSG00000133794
D
0.914
arntl1a
Gasterosteus aculeatus
ENSGACG00000002445
I
0.914
ARNTL
Gallus gallus
ENSGALG00000005378
I
0.914
ARNTL
Gorilla gorilla
ENSGGOG00000013211
I
0.914
ENSGMOG00000008906
Gadus morhua
ENSGMOG00000008906
I
0.914
ARNTL
Loxodonta africana
ENSLAFG00000026673
I
0.914
ENSLOCG00000003999
Lepisosteus oculatus
ENSLOCG00000003999
I
0.914
ARNTL
Meleagris gallopavo
ENSMGAG00000005349
I
0.914
ENSMICG00000001229
Microcebus murinus
ENSMICG00000001229
I
0.914
ARNTL
Myotis lucifugus
ENSMLUG00000008503
I
0.914
ARNTL
Macaca mulatta
ENSMMUG00000009690
I
0.914
ARNTL
Monodelphis domestica
ENSMODG00000008708
I
0.914
ENSMPUG00000013135
Mustela putorius furo
ENSMPUG00000013135
I
0.914
Arntl
Mus musculus
ENSMUSG00000055116
D
0.914
ENSNLEG00000017674
Nomascus leucogenys
ENSNLEG00000017674
I
0.914
ENSOANG00000000503
Ornithorhynchus anatinus
ENSOANG00000000503
I
0.914
ENSOARG00000007809
Ovis aries
ENSOARG00000007809
I
0.914
ARNTL
Oryctolagus cuniculus
ENSOCUG00000005940
I
0.914
ARNTL
Otolemur garnettii
ENSOGAG00000000736
I
0.914
ENSONIG00000010970
Oreochromis niloticus
ENSONIG00000010970
I
0.914
ARNTL
Ochotona princeps
ENSOPRG00000004853
I
0.914
arntl1a
Oryzias latipes
ENSORLG00000019370
I
0.914
ENSPFOG00000008027
Poecilia formosa
ENSPFOG00000008027
I
0.914
ENSPPYG00000003473
Pongo abelii
ENSPPYG00000003473
I
0.914
ENSPSIG00000013131
Pelodiscus sinensis
ENSPSIG00000013131
I
0.914
ARNTL
Pan troglodytes
ENSPTRG00000003376
I
0.914
ARNTL
Pteropus vampyrus
ENSPVAG00000006712
I
0.914
Arntl
Rattus norvegicus
ENSRNOG00000014448
D
0.914
ENSSHAG00000017357
Sarcophilus harrisii
ENSSHAG00000017357
I
0.914
ARNTL
Sus scrofa
ENSSSCG00000013397
I
0.914
ENSSTOG00000022144
Ictidomys tridecemlineatus
ENSSTOG00000022144
I
0.914
ARNTL
Tupaia belangeri
ENSTBEG00000017387
I
0.914
ENSTGUG00000014839
Taeniopygia guttata
ENSTGUG00000014839
I
0.914
ENSTGUG00000015954
Taeniopygia guttata
ENSTGUG00000015954
I
0.914
arntl1a
Tetraodon nigroviridis
ENSTNIG00000005490
I
0.914
arntl1a
Takifugu rubripes
ENSTRUG00000008391
I
0.914
ENSTSYG00000000577
Tarsius syrichta
ENSTSYG00000000577
I
0.914
ARNTL
Tursiops truncatus
ENSTTRG00000013925
I
0.914
ARNTL
Vicugna pacos
ENSVPAG00000005926
I
0.914
ENSXMAG00000015619
Xiphophorus maculatus
ENSXMAG00000015619
I
0.914
Aan_R006598
Calypte anna
Aan_R006598
I
0.914
Alligator_sinensis_CCG000787.1
Alligator sinensis
Alligator_sinensis_CCG000787.1
I
0.914
Brh_R010633
Buceros rhinoceros
Brh_R010633
I
0.914
Cmyd_10009262
Chelonia mydas
Cmyd_10009262
I
0.914
ENSBTAP00000017323-D1
Bos grunniens
ENSBTAP00000017323-D1
I
0.914
ENSP00000384517
Macaca fascicularis
ENSP00000384517
I
0.914
Gfo_R013617
Geospiza fortis
Gfo_R013617
I
0.914
Myotis_brandtii_Arntl_10004678
Myotis brandtii
Myotis_brandtii_Arntl_10004678
I
0.914
Ogr18318
Ophisaurus gracilis
Ogr18318
I
0.914
Pvit_10294
Pogona vitticeps
Pvit_10294
I
0.914
Tal_R003521
Tyto alba
Tal_R003521
I
0.914
arntl.L
Xenopus laevis
XB-GENE-17342306
I
0.914
arntl
Xenopus tropicalis
XB-GENE-495455
I
0.914
arntl.S
Xenopus laevis
XB-GENE-495459
I
0.914
ENSAMXG00000011758
Astyanax mexicanus
ENSAMXG00000011758
I
0.912
fgenesh2_pg.scaffold_279000045
Branchiostoma floridae
fgenesh2_pg.scaffold_279000045
I
0.879
fgenesh2_pg.scaffold_792000016
Branchiostoma floridae
fgenesh2_pg.scaffold_792000016
I
0.879
Ocbimv22023737m.g
Octopus bimaculoides
Ocbimv22023737m.g
I
0.879
ENSAMXG00000010089
Astyanax mexicanus
ENSAMXG00000010089
I
0.871
ENSLACG00000004629
Latimeria chalumnae
ENSLACG00000004629
I
0.871
ENSPMAG00000004171
Petromyzon marinus
ENSPMAG00000004171
I
0.868
CGI_10025278
Crassostrea gigas
CGI_10025278
I
0.858
NEMVEDRAFT_v1g132249
Nematostella vectensis
NEMVEDRAFT_v1g132249
I
0.858
NEMVEDRAFT_v1g224692
Nematostella vectensis
NEMVEDRAFT_v1g224692
I
0.858
ENSAMXG00000020233
Astyanax mexicanus
ENSAMXG00000020233
I
0.839
arntl2
Danio rerio
ENSDARG00000041381
I
0.839
ENSONIG00000014665
Oreochromis niloticus
ENSONIG00000014665
I
0.839
arntl2
Oryzias latipes
ENSORLG00000010946
I
0.839
ENSPFOG00000016287
Poecilia formosa
ENSPFOG00000016287
I
0.839
arntl2
Tetraodon nigroviridis
ENSTNIG00000012142
I
0.839
arntl2
Takifugu rubripes
ENSTRUG00000007832
I
0.839
ENSXMAG00000001482
Xiphophorus maculatus
ENSXMAG00000001482
I
0.839