ENSP00000418684-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSP00000418684-D1 T135615_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IKZF3
M08320_2.00 		Homo sapiens
TTCCCNNSB
VSNNGGGAA		 ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE 		0.827 1.000
IKZF1
M08939_2.00 		Homo sapiens
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C 		0.790 0.879
Ikzf1
M08969_2.00 		Mus musculus
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C 		0.790 0.879
IKZF1
M10301_2.00 		Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN		 Transfac
Matys et al.(2006)
V$IK1_01 		0.790 0.879
IKZF1
M10302_2.00 		Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV		 Transfac
Matys et al.(2006)
V$IK2_01 		0.790 0.879
IKZF1
M10303_2.00 		Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM		 Transfac
Matys et al.(2006)
V$IK3_01 		0.790 0.879
IKZF1
M10304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5_01 		0.790 0.879
IKZF1
M10305_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5 		0.790 0.879
IKZF1
M10306_2.00 		Homo sapiens
YYTCCCARA
TYTGGGARR		 Transfac
Matys et al.(2006)
V$LYF1_01 		0.790 0.879
IKZF2
M10105_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_01 		0.776 0.846
IKZF2
M10106_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_02 		0.776 0.846
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000418684-D1 C2H2 ZF 118 140
ENSP00000418684-D1 C2H2 ZF 146 168
ENSP00000418684-D1 C2H2 ZF 174 196
ENSP00000418684-D1 C2H2 ZF 202 223

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI05G19700 Oryza meridionalis OMERI05G19700 N
Pavir.J33892 Panicum virgatum Pavir.J33892 N
Pavir.Ca01302 Panicum virgatum Pavir.Ca01302 N
Traes_1AL_FB0C83DD9 Triticum aestivum Traes_1AL_FB0C83DD9 N
Si022117m.g Setaria italica Si022117m.g N
Sb09g024690 Sorghum bicolor Sb09g024690 N
OS05G0500600 Oryza sativa OS05G0500600 N
ORUFI05G23090 Oryza rufipogon ORUFI05G23090 N
ORGLA05G0190100 Oryza glaberrima ORGLA05G0190100 N
BGIOSGA020123 Oryza indica BGIOSGA020123 N
OLONG_006513 Oryza longistaminata OLONG_006513 N
OGLUM05G23020 Oryza glumaepatula OGLUM05G23020 N
OBART05G21830 Oryza barthii OBART05G21830 N
OB05G29380 Oryza brachyantha OB05G29380 N
MLOC_41071 Hordeum vulgare MLOC_41071 N
LPERR05G17730 Leersia perrieri LPERR05G17730 N
GRMZM2G313078 Zea mays GRMZM2G313078 N