Tal_R009708 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R009708 T137684_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.821 0.971
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.821 0.971
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.821 0.971
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.821 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R009708 C2H2 ZF 587 609
Tal_R009708 C2H2 ZF 615 637
Tal_R009708 C2H2 ZF 643 665
Tal_R009708 C2H2 ZF 671 693
Tal_R009708 C2H2 ZF 699 721
Tal_R009708 C2H2 ZF 727 748

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATF4 Homo sapiens ENSG00000128272 D 0.000
Atf4 Mus musculus ENSMUSG00000042406 D 0.000
ATF4 Pan troglodytes ENSPTRG00000014398 I 0.000
ATF4 Taeniopygia guttata ENSTGUG00000010225 I 0.000
ATF4 Tupaia belangeri ENSTBEG00000005052 I 0.000
ENSSTOG00000025644 Ictidomys tridecemlineatus ENSSTOG00000025644 I 0.000
ENSSTOG00000025355 Ictidomys tridecemlineatus ENSSTOG00000025355 I 0.000
ENSSTOG00000024459 Ictidomys tridecemlineatus ENSSTOG00000024459 I 0.000
ATF4 Sus scrofa ENSSSCG00000000084 I 0.000
ENSSHAG00000014069 Sarcophilus harrisii ENSSHAG00000014069 I 0.000
Atf4 Rattus norvegicus ENSRNOG00000017801 I 0.000
ATF4 Pteropus vampyrus ENSPVAG00000015476 I 0.000
atf4a Tetraodon nigroviridis ENSTNIG00000000373 I 0.000
ENSPSIG00000011085 Pelodiscus sinensis ENSPSIG00000011085 I 0.000
ENSPPYG00000011842 Pongo abelii ENSPPYG00000011842 I 0.000
ENSPFOG00000006088 Poecilia formosa ENSPFOG00000006088 I 0.000
ENSPFOG00000005452 Poecilia formosa ENSPFOG00000005452 I 0.000
ATF4 Procavia capensis ENSPCAG00000004089 I 0.000
ENSPANG00000025194 Papio anubis ENSPANG00000025194 I 0.000
ATF4 Oryzias latipes ENSORLG00000013424 I 0.000
atf4a Oryzias latipes ENSORLG00000010649 I 0.000
ATF4 Ochotona princeps ENSOPRG00000010583 I 0.000
ENSBTAP00000023213-D1 Bos grunniens ENSBTAP00000023213-D1 I 0.000
atf4.L Xenopus laevis XB-GENE-983847 I 0.000
atf4 Xenopus tropicalis XB-GENE-983841 I 0.000
atf4.S Xenopus laevis XB-GENE-6251859 I 0.000
Tal_R009484 Tyto alba Tal_R009484 I 0.000
Pvit_04694 Pogona vitticeps Pvit_04694 I 0.000
Ogr14426 Ophisaurus gracilis Ogr14426 I 0.000
Myotis_brandtii_ATF4_10014009 Myotis brandtii Myotis_brandtii_ATF4_10014009 I 0.000
Gfo_R004722 Geospiza fortis Gfo_R004722 I 0.000
ENSP00000384587 Macaca fascicularis ENSP00000384587 I 0.000
ENSONIG00000008552 Oreochromis niloticus ENSONIG00000008552 I 0.000
Cmyd_10007892 Chelonia mydas Cmyd_10007892 I 0.000
Brh_R011254 Buceros rhinoceros Brh_R011254 I 0.000
Alligator_sinensis_CCG008004.1 Alligator sinensis Alligator_sinensis_CCG008004.1 I 0.000
Afo_R007931 Aptenodytes forsteri Afo_R007931 I 0.000
Aan_R011605 Calypte anna Aan_R011605 I 0.000
ENSXMAG00000008039 Xiphophorus maculatus ENSXMAG00000008039 I 0.000
ENSXMAG00000002653 Xiphophorus maculatus ENSXMAG00000002653 I 0.000
ATF4 Tursiops truncatus ENSTTRG00000014581 I 0.000
atf4a Takifugu rubripes ENSTRUG00000001898 I 0.000
atf4b Danio rerio ENSDARG00000038141 I 0.000
ENSGGOG00000010115 Gorilla gorilla ENSGGOG00000010115 I 0.000
ATF4 Gallus gallus ENSGALG00000012135 I 0.000
atf4a Gasterosteus aculeatus ENSGACG00000019842 I 0.000
ATF4 Felis catus ENSFCAG00000009288 I 0.000
ENSFALG00000012313 Ficedula albicollis ENSFALG00000012313 I 0.000
ATF4 Equus caballus ENSECAG00000006931 I 0.000
Atf4 Dipodomys ordii ENSDORG00000004952 I 0.000
ENSDNOG00000046837 Dasypus novemcinctus ENSDNOG00000046837 I 0.000
atf4a Danio rerio ENSDARG00000039515 I 0.000
ENSGGOG00000024022 Gorilla gorilla ENSGGOG00000024022 I 0.000
ENSCSAG00000006330 Chlorocebus sabaeus ENSCSAG00000006330 I 0.000
ATF4 Cavia porcellus ENSCPOG00000022485 I 0.000
ATF4 Callithrix jacchus ENSCJAG00000002594 I 0.000
ATF4 Choloepus hoffmanni ENSCHOG00000008739 I 0.000
ATF4 Canis familiaris ENSCAFG00000001324 I 0.000
ATF4 Bos taurus ENSBTAG00000017462 I 0.000
ENSAPLG00000001773 Anas platyrhynchos ENSAPLG00000001773 I 0.000
ENSAMXG00000011467 Astyanax mexicanus ENSAMXG00000011467 I 0.000
ENSAMEG00000010932 Ailuropoda melanoleuca ENSAMEG00000010932 I 0.000
ENSMLUG00000027798 Myotis lucifugus ENSMLUG00000027798 I 0.000
ATF4 Anolis carolinensis ENSACAG00000007573 I 0.000
ATF4 Otolemur garnettii ENSOGAG00000033566 I 0.000
ENSOARG00000016775 Ovis aries ENSOARG00000016775 I 0.000
ATF4 Ornithorhynchus anatinus ENSOANG00000011026 I 0.000
ENSNLEG00000015257 Nomascus leucogenys ENSNLEG00000015257 I 0.000
ENSMPUG00000013386 Mustela putorius furo ENSMPUG00000013386 I 0.000
ENSMPUG00000009865 Mustela putorius furo ENSMPUG00000009865 I 0.000
ATF4 Monodelphis domestica ENSMODG00000009380 I 0.000
ENSMMUG00000004499 Macaca mulatta ENSMMUG00000004499 I 0.000
ENSONIG00000013091 Oreochromis niloticus ENSONIG00000013091 I 0.000
ENSMICG00000011448 Microcebus murinus ENSMICG00000011448 I 0.000
ATF4 Meleagris gallopavo ENSMGAG00000012387 I 0.000
ENSMEUG00000011209 Macropus eugenii ENSMEUG00000011209 I 0.000
ENSLOCG00000011103 Lepisosteus oculatus ENSLOCG00000011103 I 0.000
ATF4 Loxodonta africana ENSLAFG00000012020 I 0.000
ENSLACG00000003943 Latimeria chalumnae ENSLACG00000003943 I 0.000
ENSGMOG00000018039 Gadus morhua ENSGMOG00000018039 I 0.000
ENSGMOG00000014904 Gadus morhua ENSGMOG00000014904 I 0.000