atf4 (Xenopus tropicalis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-983841 T073123_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf4
M00759_2.00 		Mus musculus
NNNNKRCDHVHNN
NNDBDHGYMNNNN		 PBM
Weirauch et al.(2013)
pTH1014 		0.872 0.778
Atf4
M02865_2.00 		Mus musculus
DRBATGAYGCAATM
KATTGCRTCATVYH		 SELEX
Jolma et al.(2013)
Atf4_1 		0.872 0.778
Atf4
M08833_2.00 		Mus musculus
DNMTGATGCAAY
RTTGCATCAKNH		 Misc
Kulakovskiy et al.(2013)
ATF4_MOUSE.H11MO.0.A 		0.872 0.778
Atf4
M09496_2.00 		Mus musculus
MTGATGYAAY
RTTRCATCAK		 Misc
Heinz et al.(2010)
MEF-Atf4_GSE35681 		0.872 0.778
ATF4
M02834_2.00 		Homo sapiens
DNMTGAYGCAAYM
KRTTGCRTCAKNH		 SELEX
Jolma et al.(2013)
ATF4_1 		0.872 0.762
ATF4
M04274_2.00 		Homo sapiens
RDATGACGTCATHY
RDATGACGTCATHY		 SELEX
Yin et al.(2017)
ATF4_eDBD_HT-SELEX 		0.872 0.762
ATF4
M04276_2.00 		Homo sapiens
RKATGACGTCATMY
RKATGACGTCATMY		 SELEX
Yin et al.(2017)
ATF4_FL_HT-SELEX 		0.872 0.762
ATF4
M04027_2.00 		Homo sapiens
VNATGACGTCABNY
RNVTGACGTCATNB		 SELEX
Rodriguez-Martinez et al.(2017)
ATF4.1 		0.872 0.762
ATF4
M08796_2.00 		Homo sapiens
DNMTGATGCAAY
RTTGCATCAKNH		 Misc
Kulakovskiy et al.(2013)
ATF4_HUMAN.H11MO.0.A 		0.872 0.762
ATF4
M09963_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF4_Q2 		0.872 0.762
ATF4
M09964_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF4_Q5 		0.872 0.762
ATF4
M09965_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF4_Q6 		0.872 0.762
ATF4
M04275_2.00 		Homo sapiens
RKATGACATCATCY
RGATGATGTCATMY		 SELEX
Yin et al.(2017)
ATF4_eDBD_Methyl-HT-SELEX 		0.872 0.762
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH74520 bZIP 261 323
CAJ83038 bZIP 268 330

Links

Other bZIP family TFs
Other Xenopus tropicalis TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
atf4.L Xenopus laevis XB-GENE-983847 I 0.903
Pvit_04694 Pogona vitticeps Pvit_04694 I 0.896
Alligator_sinensis_CCG008004.1 Alligator sinensis Alligator_sinensis_CCG008004.1 I 0.892
Afo_R007931 Aptenodytes forsteri Afo_R007931 I 0.880
ATF4 Monodelphis domestica ENSMODG00000009380 I 0.879
ENSPSIG00000011085 Pelodiscus sinensis ENSPSIG00000011085 I 0.879
ENSSHAG00000014069 Sarcophilus harrisii ENSSHAG00000014069 I 0.879
ENSAPLG00000001773 Anas platyrhynchos ENSAPLG00000001773 I 0.877
ENSFALG00000012313 Ficedula albicollis ENSFALG00000012313 I 0.877
ATF4 Gallus gallus ENSGALG00000012135 I 0.877
ATF4 Taeniopygia guttata ENSTGUG00000010225 I 0.877
Aan_R011605 Calypte anna Aan_R011605 I 0.877
Brh_R011254 Buceros rhinoceros Brh_R011254 I 0.877
Gfo_R004722 Geospiza fortis Gfo_R004722 I 0.877
Tal_R009484 Tyto alba Tal_R009484 I 0.877
Ogr14426 Ophisaurus gracilis Ogr14426 I 0.874
atf4.S Xenopus laevis XB-GENE-6251859 I 0.873
ENSAMEG00000010932 Ailuropoda melanoleuca ENSAMEG00000010932 I 0.872
ATF4 Bos taurus ENSBTAG00000017462 I 0.872
ATF4 Canis familiaris ENSCAFG00000001324 I 0.872
ATF4 Choloepus hoffmanni ENSCHOG00000008739 I 0.872
ATF4 Callithrix jacchus ENSCJAG00000002594 I 0.872
ATF4 Cavia porcellus ENSCPOG00000022485 I 0.872
ENSCSAG00000006330 Chlorocebus sabaeus ENSCSAG00000006330 I 0.872
ENSDNOG00000030854 Dasypus novemcinctus ENSDNOG00000030854 I 0.872
ENSDNOG00000046837 Dasypus novemcinctus ENSDNOG00000046837 I 0.872
Atf4 Dipodomys ordii ENSDORG00000004952 I 0.872
ATF4 Equus caballus ENSECAG00000006931 I 0.872
ATF4 Felis catus ENSFCAG00000009288 I 0.872
ATF4 Homo sapiens ENSG00000128272 D 0.872
ENSGGOG00000010115 Gorilla gorilla ENSGGOG00000010115 I 0.872
ATF4 Loxodonta africana ENSLAFG00000012020 I 0.872
ENSMICG00000011448 Microcebus murinus ENSMICG00000011448 I 0.872
ENSMMUG00000004499 Macaca mulatta ENSMMUG00000004499 I 0.872
Atf4 Mus musculus ENSMUSG00000042406 D 0.872
ENSNLEG00000015257 Nomascus leucogenys ENSNLEG00000015257 I 0.872
ENSOARG00000016775 Ovis aries ENSOARG00000016775 I 0.872
ATF4 Otolemur garnettii ENSOGAG00000033566 I 0.872
ENSPANG00000025194 Papio anubis ENSPANG00000025194 I 0.872
ATF4 Procavia capensis ENSPCAG00000004089 I 0.872
ENSPPYG00000011842 Pongo abelii ENSPPYG00000011842 I 0.872
ATF4 Pan troglodytes ENSPTRG00000014398 I 0.872
ATF4 Pteropus vampyrus ENSPVAG00000015476 I 0.872
Atf4 Rattus norvegicus ENSRNOG00000017801 I 0.872
ATF4 Sus scrofa ENSSSCG00000000084 I 0.872
ENSSTOG00000025355 Ictidomys tridecemlineatus ENSSTOG00000025355 I 0.872
ATF4 Tupaia belangeri ENSTBEG00000005052 I 0.872
ATF4 Tursiops truncatus ENSTTRG00000014581 I 0.872
ENSBTAP00000023213-D1 Bos grunniens ENSBTAP00000023213-D1 I 0.872
ENSP00000384587 Macaca fascicularis ENSP00000384587 I 0.872
ENSMPUG00000009865 Mustela putorius furo ENSMPUG00000009865 I 0.871
ENSMPUG00000013386 Mustela putorius furo ENSMPUG00000013386 I 0.871
ATF4 Ornithorhynchus anatinus ENSOANG00000011026 I 0.870
Cmyd_10007892 Chelonia mydas Cmyd_10007892 I 0.870
ENSLOCG00000011103 Lepisosteus oculatus ENSLOCG00000011103 I 0.867
ENSMEUG00000011209 Macropus eugenii ENSMEUG00000011209 I 0.866
ENSMLUG00000027798 Myotis lucifugus ENSMLUG00000027798 I 0.861
Myotis_brandtii_ATF4_10014009 Myotis brandtii Myotis_brandtii_ATF4_10014009 I 0.861
ATF4 Anolis carolinensis ENSACAG00000007573 I 0.856
ENSLACG00000003943 Latimeria chalumnae ENSLACG00000003943 I 0.853
ENSAMXG00000011467 Astyanax mexicanus ENSAMXG00000011467 I 0.847
ENSGMOG00000018039 Gadus morhua ENSGMOG00000018039 I 0.847
ATF4 Meleagris gallopavo ENSMGAG00000012387 I 0.845
ATF4 Ochotona princeps ENSOPRG00000010583 I 0.845
ENSPFOG00000005452 Poecilia formosa ENSPFOG00000005452 I 0.845
ENSXMAG00000002653 Xiphophorus maculatus ENSXMAG00000002653 I 0.845
atf4b Danio rerio ENSDARG00000038141 I 0.841
atf4a Gasterosteus aculeatus ENSGACG00000019842 I 0.836
ENSGGOG00000024022 Gorilla gorilla ENSGGOG00000024022 I 0.834
ENSPFOG00000006088 Poecilia formosa ENSPFOG00000006088 I 0.834
atf4a Tetraodon nigroviridis ENSTNIG00000000373 I 0.834
atf4a Takifugu rubripes ENSTRUG00000001898 I 0.834
ENSXMAG00000008039 Xiphophorus maculatus ENSXMAG00000008039 I 0.834
atf4a Danio rerio ENSDARG00000039515 I 0.833
ENSONIG00000013091 Oreochromis niloticus ENSONIG00000013091 I 0.832
ENSGMOG00000014904 Gadus morhua ENSGMOG00000014904 I 0.831
ENSONIG00000008552 Oreochromis niloticus ENSONIG00000008552 I 0.830
ATF4 Oryzias latipes ENSORLG00000013424 I 0.829
atf4a Oryzias latipes ENSORLG00000010649 I 0.823