Carubv10009617m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10009617m.g T142712_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009617m C2H2 ZF 274 295
Carubv10009617m C2H2 ZF 294 320

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006953 Oryza indica BGIOSGA006953 N 0.000
BGIOSGA019943 Oryza indica BGIOSGA019943 N 0.000
MLOC_70503 Hordeum vulgare MLOC_70503 N 0.000
OB0245G10010 Oryza brachyantha OB0245G10010 N 0.000
OGLUM02G07340 Oryza glumaepatula OGLUM02G07340 N 0.000
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.000
OMERI05G15970 Oryza meridionalis OMERI05G15970 N 0.000
ONIVA05G19190 Oryza nivara ONIVA05G19190 N 0.000
OPUNC02G06490 Oryza punctata OPUNC02G06490 N 0.000
OPUNC05G16080 Oryza punctata OPUNC05G16080 N 0.000
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.000
Solyc06g074360.2 Solanum lycopersicum Solyc06g074360.2 N 0.000
Traes_5AL_78701B16C Triticum aestivum Traes_5AL_78701B16C N 0.000
Traes_7AS_9671D35EF Triticum aestivum Traes_7AS_9671D35EF N 0.000
TRIUR3_33088 Triticum urartu TRIUR3_33088 N 0.000
PK07396.1 Cannabis sativa PK07396.1 N 0.000