AAK54135 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AAK54135 T143642_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.825 0.974
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.825 0.974
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.825 0.974
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.825 0.974
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.825 0.974
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.825 0.974
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.825 0.974
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.825 0.974
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.825 0.974
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.825 0.974
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.825 0.974
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.825 0.974
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.821 0.965
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.807
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAK54135 C2H2 ZF 126 148
AAK54135 C2H2 ZF 157 179
AAK54135 C2H2 ZF 183 205
AAK54135 C2H2 ZF 211 233
AAK54135 C2H2 ZF 239 260

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SNAI2 Homo sapiens ENSG00000019549 D 0.825
Snai2 Mus musculus ENSMUSG00000022676 D 0.825
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.827
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.827
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.827
Aan_R012932 Calypte anna Aan_R012932 I 0.827
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.827
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.825
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.827
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.825
Cmyd_10017446 Chelonia mydas Cmyd_10017446 I 0.758
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.825
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.827
ENSPSIG00000003607 Pelodiscus sinensis ENSPSIG00000003607 I 0.756
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.825
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.825
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.827
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.825
AAB34088 Xenopus laevis AAB34088 I 0.827
snai2.S Xenopus laevis XB-GENE-865699 I 0.827
snai1.S Xenopus laevis XB-GENE-865328 I 0.759
snai2.L Xenopus laevis XB-GENE-6255814 I 0.827
snai2 Xenopus tropicalis XB-GENE-487371 I 0.827
snai1 Xenopus tropicalis XB-GENE-479970 I 0.759
AAK54139 Xenopus laevis AAK54139 I 0.827
AAK54137 Xenopus laevis AAK54137 I 0.827
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.827
Tal_R003673 Tyto alba Tal_R003673 I 0.827
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.827
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.827
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.825
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.827
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.825
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.825
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.825
SNAI2 Equus caballus ENSECAG00000010120 I 0.825
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.825
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.825
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.827
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.825
SNAI2 Felis catus ENSFCAG00000015779 I 0.825
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.825
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.825
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.825
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.825
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.823
ENSLACG00000017707 Latimeria chalumnae ENSLACG00000017707 I 0.000
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.825
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.823
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.827
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.825
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.827
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.825
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.825
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.825
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.827
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.825
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.825
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.827
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.825
SNAI1 Anolis carolinensis ENSACAG00000015607 N 0.000
ENSAPLG00000014633 Anas platyrhynchos ENSAPLG00000014633 N 0.000
Pvit_03333 Pogona vitticeps Pvit_03333 N 0.000
Ogr08528 Ophisaurus gracilis Ogr08528 N 0.000
ENSFALG00000012974 Ficedula albicollis ENSFALG00000012974 N 0.000
Gfo_R009598 Geospiza fortis Gfo_R009598 N 0.000
SNAI1 Gallus gallus ENSGALG00000008018 N 0.000
Afo_R003266 Aptenodytes forsteri Afo_R003266 N 0.000
Aan_R003278 Calypte anna Aan_R003278 N 0.000
SNAI1 Taeniopygia guttata ENSTGUG00000008724 N 0.000
SNAI1 Meleagris gallopavo ENSMGAG00000009447 N 0.000
SNAI1 Ornithorhynchus anatinus ENSOANG00000008681 N 0.000