22332_YPR013C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 22332_YPR013C T145951_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.827 0.978
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.827 0.978
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.827 0.978
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.827 0.978
YPR015C
M01540_2.00 		Saccharomyces cerevisiae
YTSBBBN
NVVVSAR		 PBM
Zhu et al.(2009)
Ypr015c 		0.776 0.848
YPR015C
M08546_2.00 		Saccharomyces cerevisiae
BNNNDVCGTAAATCMYNDHH
DDHNRKGATTTACGBHNNNV		 Misc
DeBoer et al.(2011)
YPR015C_871 		0.776 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
22332_YPR013C C2H2 ZF 254 276
22332_YPR013C C2H2 ZF 282 306

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
YPR015C Saccharomyces cerevisiae YPR015C D 0.776
CMR3 Saccharomyces cerevisiae YPR013C D 0.827
SU7_3627 Saccharomyces arboricola SU7_3627 I 0.776
SAKL0H20416g Lachancea kluyveri SAKL0H20416g I 0.810
25604_YPR015C Saccharomyces bayanus 25604_YPR015C I 0.776
25590_YPR013C Saccharomyces bayanus 25590_YPR013C I 0.827
23365_YPR013C Saccharomyces paradoxus 23365_YPR013C I 0.827
23355_YPR015C Saccharomyces paradoxus 23355_YPR015C I 0.776
22337_YPR015C Saccharomyces mikatae 22337_YPR015C I 0.776
Scas_Contig707.46 Saccharomyces castellii Scas_Contig707.46 I 0.792
ZYRO0E02684g Zygosaccharomyces rouxii ZYRO0E02684g I 0.821
ZBAI_08373 Zygosaccharomyces bailii ZBAI_08373 I 0.821
ZBAI_03368 Zygosaccharomyces bailii ZBAI_03368 I 0.821
TDEL_0F01170 Torulaspora delbrueckii TDEL_0F01170 I 0.816
TBLA_0E03930 Tetrapisispora blattae TBLA_0E03930 I 0.806
CAGL0J01595g Candida glabrata CAGL0J01595g I 0.821
SU7_3626 Saccharomyces arboricola SU7_3626 I 0.827
SKUD_171403 Saccharomyces kudriavzevii SKUD_171403 I 0.827
NDAI_0B02080 Naumovozyma dairenensis NDAI_0B02080 I 0.817
NDAI_0B01940 Naumovozyma dairenensis NDAI_0B01940 I 0.801
NCAS_0C04230 Naumovozyma castellii NCAS_0C04230 I 0.792
NCAS_0B04660 Naumovozyma castellii NCAS_0B04660 I 0.774
KNAG_0G01140 Kazachstania naganishii KNAG_0G01140 I 0.792
KNAG_0D02290 Kazachstania naganishii KNAG_0D02290 I 0.801
KNAG_0D02280 Kazachstania naganishii KNAG_0D02280 I 0.781
KLLA0_A04609g Kluyveromyces lactis KLLA0_A04609g I 0.765
KAFR_0C03140 Kazachstania africana KAFR_0C03140 I 0.822
KAFR_0B02000 Kazachstania africana KAFR_0B02000 I 0.803
KAFR_0B01990 Kazachstania africana KAFR_0B01990 I 0.821
CAGL0L05786g Candida glabrata CAGL0L05786g I 0.806