23355_YPR015C (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 23355_YPR015C T145959_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YPR015C
M01540_2.00 		Saccharomyces cerevisiae
YTSBBBN
NVVVSAR		 PBM
Zhu et al.(2009)
Ypr015c 		0.827 1.000
YPR015C
M08546_2.00 		Saccharomyces cerevisiae
BNNNDVCGTAAATCMYNDHH
DDHNRKGATTTACGBHNNNV		 Misc
DeBoer et al.(2011)
YPR015C_871 		0.827 1.000
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.776 0.848
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.776 0.848
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.776 0.848
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.776 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23355_YPR015C C2H2 ZF 185 207
23355_YPR015C C2H2 ZF 213 237

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SU7_3627 Saccharomyces arboricola SU7_3627 I 0.827
YPR015C Saccharomyces cerevisiae YPR015C D 0.827
22337_YPR015C Saccharomyces mikatae 22337_YPR015C I 0.827
25604_YPR015C Saccharomyces bayanus 25604_YPR015C I 0.827
SAKL0H20416g Lachancea kluyveri SAKL0H20416g I 0.777
CAGL0J01595g Candida glabrata CAGL0J01595g I 0.776
KAFR_0B01990 Kazachstania africana KAFR_0B01990 I 0.776
SKUD_171403 Saccharomyces kudriavzevii SKUD_171403 I 0.776
SU7_3626 Saccharomyces arboricola SU7_3626 I 0.776
CMR3 Saccharomyces cerevisiae YPR013C D 0.776
ZBAI_03368 Zygosaccharomyces bailii ZBAI_03368 I 0.776
ZBAI_08373 Zygosaccharomyces bailii ZBAI_08373 I 0.776
ZYRO0E02684g Zygosaccharomyces rouxii ZYRO0E02684g I 0.776
22332_YPR013C Saccharomyces mikatae 22332_YPR013C I 0.776
23365_YPR013C Saccharomyces paradoxus 23365_YPR013C I 0.776
25590_YPR013C Saccharomyces bayanus 25590_YPR013C I 0.776
NDAI_0B01940 Naumovozyma dairenensis NDAI_0B01940 I 0.772
CAGL0L05786g Candida glabrata CAGL0L05786g I 0.771
KAFR_0C03140 Kazachstania africana KAFR_0C03140 I 0.771
TBLA_0E03930 Tetrapisispora blattae TBLA_0E03930 I 0.771
TDEL_0F01170 Torulaspora delbrueckii TDEL_0F01170 I 0.771
NDAI_0B02080 Naumovozyma dairenensis NDAI_0B02080 I 0.766
KLLA0_A04609g Kluyveromyces lactis KLLA0_A04609g I 0.761
KNAG_0D02290 Kazachstania naganishii KNAG_0D02290 I 0.756