23355_YPR015C (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 23355_YPR015C T145959_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YPR015C
M01540_2.00 		Saccharomyces cerevisiae
YTSBBBN
NVVVSAR		 PBM
Zhu et al.(2009)
Ypr015c 		0.827 1.000
YPR015C
M08546_2.00 		Saccharomyces cerevisiae
BNNNDVCGTAAATCMYNDHH
DDHNRKGATTTACGBHNNNV		 Misc
DeBoer et al.(2011)
YPR015C_871 		0.827 1.000
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.776 0.848
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.776 0.848
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.776 0.848
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.776 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23355_YPR015C C2H2 ZF 185 207
23355_YPR015C C2H2 ZF 213 237

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
YPR015C Saccharomyces cerevisiae YPR015C D 0.827
CMR3 Saccharomyces cerevisiae YPR013C D 0.776
TDEL_0F01170 Torulaspora delbrueckii TDEL_0F01170 I 0.771
SAKL0H20416g Lachancea kluyveri SAKL0H20416g I 0.777
25604_YPR015C Saccharomyces bayanus 25604_YPR015C I 0.827
25590_YPR013C Saccharomyces bayanus 25590_YPR013C I 0.776
23365_YPR013C Saccharomyces paradoxus 23365_YPR013C I 0.776
22337_YPR015C Saccharomyces mikatae 22337_YPR015C I 0.827
22332_YPR013C Saccharomyces mikatae 22332_YPR013C I 0.776
ZYRO0E02684g Zygosaccharomyces rouxii ZYRO0E02684g I 0.776
ZBAI_08373 Zygosaccharomyces bailii ZBAI_08373 I 0.776
ZBAI_03368 Zygosaccharomyces bailii ZBAI_03368 I 0.776
CAGL0J01595g Candida glabrata CAGL0J01595g I 0.776
TBLA_0E03930 Tetrapisispora blattae TBLA_0E03930 I 0.771
SU7_3627 Saccharomyces arboricola SU7_3627 I 0.827
SU7_3626 Saccharomyces arboricola SU7_3626 I 0.776
SKUD_171403 Saccharomyces kudriavzevii SKUD_171403 I 0.776
NDAI_0B02080 Naumovozyma dairenensis NDAI_0B02080 I 0.766
NDAI_0B01940 Naumovozyma dairenensis NDAI_0B01940 I 0.772
KNAG_0D02290 Kazachstania naganishii KNAG_0D02290 I 0.756
KLLA0_A04609g Kluyveromyces lactis KLLA0_A04609g I 0.761
KAFR_0C03140 Kazachstania africana KAFR_0C03140 I 0.771
KAFR_0B01990 Kazachstania africana KAFR_0B01990 I 0.776
CAGL0L05786g Candida glabrata CAGL0L05786g I 0.771