HCOI00972500 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00972500 T153830_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mnm-2
M00616_2.00 		Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY		 PBM
Narasimhan et al.(2015)
pTH9080 		0.794 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00972500.t1 C2H2 ZF 161 183
HCOI00972500.t1 C2H2 ZF 189 211
HCOI00972500.t1 C2H2 ZF 217 239

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mnm-2 Caenorhabditis elegans WBGene00003380 D 0.794
ACOC_0000685901 Angiostrongylus costaricensis ACOC_0000685901 I 0.797
RSKR_0000680500 Rhabditophanes kr3021 RSKR_0000680500 I 0.794
nDi.2.2.2.g05062 Dirofilaria immitis nDi.2.2.2.g05062 I 0.764
NBR_0000581401 Nippostrongylus brasiliensis NBR_0000581401 I 0.788
HPBE_0001596301 Heligmosomoides bakeri HPBE_0001596301 I 0.801
EVEC_0000906601 Enterobius vermicularis EVEC_0000906601 I 0.777
DME_0000476501 Dracunculus medinensis DME_0000476501 I 0.780
DICVIV_12463 Dictyocaulus viviparus DICVIV_12463 I 0.797
ASU_05270 Ascaris suum ASU_05270 I 0.787
ANCCEY_06081 Ancylostoma ceylanicum ANCCEY_06081 I 0.797
Bm2124 Brugia malayi Bm2124 I 0.780
ACAC_0001268601 Angiostrongylus cantonensis ACAC_0001268601 I 0.797
WBGene00238816 Onchocerca volvulus WBGene00238816 I 0.780
LOAG_05928 Loa loa LOAG_05928 I 0.761
CRE00068 Caenorhabditis remanei CRE00068 I 0.794
CJA18173 Caenorhabditis japonica CJA18173 I 0.794
CBN21670 Caenorhabditis brenneri CBN21670 I 0.794
CBG16689 Caenorhabditis briggsae CBG16689 I 0.794