MhA1_Contig1061.frz3.gene12 (Meloidogyne hapla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 MhA1_Contig1061.frz3.gene12 T154950_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.785 0.837
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.785 0.837
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.785 0.837
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1061.frz3.gene12 C2H2 ZF 313 335
MhA1_Contig1061.frz3.gene12 C2H2 ZF 341 363
MhA1_Contig1061.frz3.gene12 C2H2 ZF 369 391
MhA1_Contig1061.frz3.gene12 C2H2 ZF 397 420

Links

Other C2H2 ZF family TFs
Other Meloidogyne hapla TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
sens Drosophila melanogaster FBgn0002573 D 0.785
GFI1B Homo sapiens ENSG00000165702 D 0.791
AMEM009379 Anopheles merus AMEM009379 I 0.797
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I 0.797
AMEC011115 Anopheles melas AMEC011115 I 0.797
AFAF000823 Anopheles farauti AFAF000823 I 0.797
ADIR005637 Anopheles dirus ADIR005637 I 0.797
ACOM022805 Anopheles coluzzii ACOM022805 I 0.797
AATE011452 Anopheles atroparvus AATE011452 I 0.797
LCUP007432 Lucilia cuprina LCUP007432 I 0.785
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I 0.780
TC013474 Tribolium castaneum TC013474 I 0.787
PHUM248190 Pediculus humanus PHUM248190 I 0.799
NV16026 Nasonia vitripennis NV16026 I 0.785
MESCA000812 Megaselia scalaris MESCA000812 I 0.785
LotgiG98465 Lottia gigantea LotgiG98465 I 0.786
L798_01833 Zootermopsis nevadensis L798_01833 I 0.789
ASTEI06414 Anopheles stephensi ASTEI06414 I 0.797
HMEL012459 Heliconius melpomene HMEL012459 I 0.797
MDOA006012 Musca domestica MDOA006012 I 0.775
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I 0.795
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I 0.795
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I 0.798
HCOI00212900 Haemonchus contortus HCOI00212900 I 0.796
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I 0.799
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I 0.795
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I 0.798
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I 0.795
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I 0.795
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I 0.798
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I 0.795
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I 0.795
GG13774 Drosophila erecta FBgn0106037 I 0.785
AAEL000869 Aedes aegypti AAEL000869 I 0.797
AGAP010926 Anopheles gambiae AGAP010926 I 0.797
BGIBMGA003190 Bombyx mori BGIBMGA003190 I 0.792
Bm9493 Brugia malayi Bm9493 I 0.804
CGI_10001094 Crassostrea gigas CGI_10001094 I 0.774
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I 0.780
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.791
GFI1B Macaca mulatta ENSMMUG00000005948 I 0.791
GFI1B Ochotona princeps ENSOPRG00000000125 I 0.791
GFI1 Procavia capensis ENSPCAG00000011020 I 0.785
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I 0.785
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.785
GA16696 Drosophila pseudoobscura FBgn0076711 I 0.785
GF10411 Drosophila ananassae FBgn0087452 I 0.785
KGM_22443 Danaus plexippus KGM_22443 I 0.797
GH16734 Drosophila grimshawi FBgn0124205 I 0.785
GI13460 Drosophila mojavensis FBgn0136216 I 0.785
GL15695 Drosophila persimilis FBgn0153299 I 0.785
GM24598 Drosophila sechellia FBgn0179461 I 0.785
GD12667 Drosophila simulans FBgn0184394 I 0.785
GJ11823 Drosophila virilis FBgn0199077 I 0.785
GK12454 Drosophila willistoni FBgn0214464 I 0.785
GE20069 Drosophila yakuba FBgn0237393 I 0.785
GA28112 Drosophila pseudoobscura FBgn0249475 I 0.785
GB48486 Apis mellifera GB48486 I 0.797
HelroG145534 Helobdella robusta HelroG145534 I 0.766
HelroG145685 Helobdella robusta HelroG145685 I 0.765
HelroG67579 Helobdella robusta HelroG67579 I 0.762
WUBG_13248 Wuchereria bancrofti WUBG_13248 I 0.799