HCOI00212900 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00212900 T153792_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.787 0.848
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.787 0.848
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.787 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00212900.t1 C2H2 ZF 122 144
HCOI00212900.t1 C2H2 ZF 150 172
HCOI00212900.t1 C2H2 ZF 178 200
HCOI00212900.t1 C2H2 ZF 206 228

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I 0.802
MESCA000812 Megaselia scalaris MESCA000812 I 0.799
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I 0.799
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I 0.799
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I 0.799
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I 0.799
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I 0.797
GB48486 Apis mellifera GB48486 I 0.796
MhA1_Contig1061.frz3.gene12 Meloidogyne hapla MhA1_Contig1061.frz3.gene12 I 0.796
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I 0.794
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.787
sens Drosophila melanogaster FBgn0002573 D 0.787
GA16696 Drosophila pseudoobscura FBgn0076711 I 0.787
GF10411 Drosophila ananassae FBgn0087452 I 0.787
GG13774 Drosophila erecta FBgn0106037 I 0.787
GH16734 Drosophila grimshawi FBgn0124205 I 0.787
GI13460 Drosophila mojavensis FBgn0136216 I 0.787
GL15695 Drosophila persimilis FBgn0153299 I 0.787
GM24598 Drosophila sechellia FBgn0179461 I 0.787
GD12667 Drosophila simulans FBgn0184394 I 0.787
GJ11823 Drosophila virilis FBgn0199077 I 0.787
GK12454 Drosophila willistoni FBgn0214464 I 0.787
GE20069 Drosophila yakuba FBgn0237393 I 0.787
GA28112 Drosophila pseudoobscura FBgn0249475 I 0.787
LCUP007432 Lucilia cuprina LCUP007432 I 0.787
WUBG_13248 Wuchereria bancrofti WUBG_13248 I 0.785
Bm9493 Brugia malayi Bm9493 I 0.785
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I 0.785
AAEL000869 Aedes aegypti AAEL000869 I 0.784
AGAP010926 Anopheles gambiae AGAP010926 I 0.784
HMEL012459 Heliconius melpomene HMEL012459 I 0.784
KGM_22443 Danaus plexippus KGM_22443 I 0.784
NV16026 Nasonia vitripennis NV16026 I 0.784
AATE011452 Anopheles atroparvus AATE011452 I 0.784
ACOM022805 Anopheles coluzzii ACOM022805 I 0.784
ADIR005637 Anopheles dirus ADIR005637 I 0.784
AFAF000823 Anopheles farauti AFAF000823 I 0.784
AMEC011115 Anopheles melas AMEC011115 I 0.784
AMEM009379 Anopheles merus AMEM009379 I 0.784
ASTEI06414 Anopheles stephensi ASTEI06414 I 0.784
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I 0.784
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I 0.782
GFI1 Procavia capensis ENSPCAG00000011020 I 0.782
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I 0.782
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I 0.782
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.781
GFI1B Homo sapiens ENSG00000165702 D 0.781
GFI1B Macaca mulatta ENSMMUG00000005948 I 0.781
GFI1B Ochotona princeps ENSOPRG00000000125 I 0.781
BGIBMGA003190 Bombyx mori BGIBMGA003190 I 0.779
PHUM248190 Pediculus humanus PHUM248190 I 0.779
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I 0.779
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I 0.779
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I 0.779
HelroG145685 Helobdella robusta HelroG145685 I 0.777
LotgiG98465 Lottia gigantea LotgiG98465 I 0.777
MDOA006012 Musca domestica MDOA006012 I 0.777
L798_01833 Zootermopsis nevadensis L798_01833 I 0.776
TC013474 Tribolium castaneum TC013474 I 0.774
CGI_10001094 Crassostrea gigas CGI_10001094 I 0.772
HelroG145534 Helobdella robusta HelroG145534 I 0.770
tetur01g07180 Tetranychus urticae tetur01g07180 N 0.761
Alligator_sinensis_CCG007190.1 Alligator sinensis Alligator_sinensis_CCG007190.1 N 0.761
HelroG67579 Helobdella robusta HelroG67579 I 0.759