nLs.2.1.2.g01196 (Litomosoides sigmodontis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nLs.2.1.2.g01196 T155316_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t01196-RA C2H2 ZF 80 102
nLs.2.1.2.t01196-RA C2H2 ZF 108 131
nLs.2.1.2.t01196-RA C2H2 ZF 139 162

Links

Other C2H2 ZF family TFs
Other Litomosoides sigmodontis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC02G29130 Oryza punctata OPUNC02G29130 N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
Lus10038432.g Linum usitatissimum Lus10038432.g N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
Pm010610 Prunus mume Pm010610 N
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N
ORUFI12G13970 Oryza rufipogon ORUFI12G13970 N
ORGLA12G0114800 Oryza glaberrima ORGLA12G0114800 N
OPUNC12G11490 Oryza punctata OPUNC12G11490 N
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
ONIVA12G13030 Oryza nivara ONIVA12G13030 N
OGLUM12G14400 Oryza glumaepatula OGLUM12G14400 N
OB12G20560 Oryza brachyantha OB12G20560 N
OB07G14260 Oryza brachyantha OB07G14260 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
Bra022993 Brassica rapa Bra022993 N
Bra021933 Brassica rapa Bra021933 N
Bra005389 Brassica rapa Bra005389 N
Bo4g182930 Brassica oleracea Bo4g182930 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bo3g028090 Brassica oleracea Bo3g028090 N
BHLH53 Arabidopsis thaliana AT2G34820 N
BHLH52 Arabidopsis thaliana AT1G30670 N