RSKR_0000680500 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000680500 T155902_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mnm-2
M00616_2.00 		Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY		 PBM
Narasimhan et al.(2015)
pTH9080 		0.804 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000680500.1 C2H2 ZF 219 241
RSKR_0000680500.1 C2H2 ZF 247 269
RSKR_0000680500.1 C2H2 ZF 275 297

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCHCODRAFT_110420 Schizophyllum commune SCHCODRAFT_110420 D
M378DRAFT_452363 Amanita muscaria M378DRAFT_452363 I
EuGene3000845 Heterobasidion annosum EuGene3000845 I
SCLCIDRAFT_13268 Scleroderma citrinum SCLCIDRAFT_13268 I
PLEOSDRAFT_1027210 Pleurotus ostreatus PLEOSDRAFT_1027210 I
PHLGIDRAFT_21983 Phlebiopsis gigantea PHLGIDRAFT_21983 I
PAXRUDRAFT_62501 Paxillus rubicundulus PAXRUDRAFT_62501 I
Moror_6823 Moniliophthora roreri Moror_6823 I
M413DRAFT_441939 Hebeloma cylindrosporum M413DRAFT_441939 I
BN946_scf184775.g25 Trametes cinnabarina BN946_scf184775.g25 I
LACBIDRAFT_313819 Laccaria bicolor LACBIDRAFT_313819 I
K443DRAFT_671198 Laccaria amethystina K443DRAFT_671198 I
JAAARDRAFT_97104 Jaapia argillacea JAAARDRAFT_97104 I
HETIRDRAFT_248323 Heterobasidion irregulare HETIRDRAFT_248323 I
GLOTRDRAFT_21049 Gloeophyllum trabeum GLOTRDRAFT_21049 I
GALMADRAFT_249199 Galerina marginata GALMADRAFT_249199 I
FIBRA_03533 Fibroporia radiculosa FIBRA_03533 I
CY34DRAFT_802483 Suillus luteus CY34DRAFT_802483 I
CERSUDRAFT_123724 Ceriporiopsis subvermispora CERSUDRAFT_123724 I
CC1G_14187 Coprinopsis cinerea CC1G_14187 I
M404DRAFT_75055 Pisolithus tinctorius M404DRAFT_75055 N
FOMPIDRAFT_38053 Fomitopsis pinicola FOMPIDRAFT_38053 N
PISMIDRAFT_84092 Pisolithus microcarpus PISMIDRAFT_84092 N
POSPLDRAFT_38779 Postia placenta POSPLDRAFT_38779 N