scaffold607-EXSNAP2012.2 (Pristionchus exspectatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 scaffold607-EXSNAP2012.2 T156117_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold607-EXSNAP2012.2 C2H2 ZF 226 248
scaffold607-EXSNAP2012.2 C2H2 ZF 254 276
scaffold607-EXSNAP2012.2 C2H2 ZF 282 304
scaffold607-EXSNAP2012.2 C2H2 ZF 310 332
scaffold607-EXSNAP2012.2 C2H2 ZF 338 359

Links

Other C2H2 ZF family TFs
Other Pristionchus exspectatus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D918_01175 Trichuris suis D918_01175 I 0.760
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.760
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.760
TCNE_0001220201 Toxocara canis TCNE_0001220201 I 0.780
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I 0.790
SMUV_0001104401 Syphacia muris SMUV_0001104401 I 0.762
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I 0.768
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I 0.766
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I 0.768
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I 0.762
DME_0000608401 Dracunculus medinensis DME_0000608401 I 0.782
WUBG_04696 Wuchereria bancrofti WUBG_04696 I 0.768
D917_07972 Trichinella nativa D917_07972 I 0.772
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I 0.756
BTMF_0000836601 Brugia timori BTMF_0000836601 I 0.768
ASU_05469 Ascaris suum ASU_05469 I 0.778
WBGene00238199 Onchocerca volvulus WBGene00238199 I 0.768
LOAG_11444 Loa loa LOAG_11444 I 0.768
EFV52614 Trichinella spiralis EFV52614 I 0.769
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I 0.757
Bm3574 Brugia malayi Bm3574 I 0.768
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N 0.762
Minc14190 Meloidogyne incognita Minc14190 N 0.760
Ppa-blmp-1 Pristionchus pacificus PPA04977 N 0.825
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 N 0.756