CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Bos taurus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSBTAG00000044032
T167856_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000053688
CxxC
566
612
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Bos taurus
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008763
Oryza indica
BGIOSGA008763
N
0.000
BGIOSGA008764
Oryza indica
BGIOSGA008764
N
0.000
GRMZM5G825321
Zea mays
GRMZM5G825321
N
0.000
OBART02G26880
Oryza barthii
OBART02G26880
N
0.000
OBART02G26890
Oryza barthii
OBART02G26890
N
0.000
OGLUM04G21070
Oryza glumaepatula
OGLUM04G21070
N
0.000
OLONG_010301
Oryza longistaminata
OLONG_010301
N
0.000
OMERI04G17630
Oryza meridionalis
OMERI04G17630
N
0.000
ONIVA02G29390
Oryza nivara
ONIVA02G29390
N
0.000
OPUNC04G18860
Oryza punctata
OPUNC04G18860
N
0.000
ORGLA02G0231600
Oryza glaberrima
ORGLA02G0231600
N
0.000
ORUFI02G28320
Oryza rufipogon
ORUFI02G28320
N
0.000
ORUFI02G28330
Oryza rufipogon
ORUFI02G28330
N
0.000
OS02G0662700
Oryza sativa
OS02G0662700
N
0.000
Pavir.J32109
Panicum virgatum
Pavir.J32109
N
0.000