CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J32109
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J32109
T203087_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J32109.1.p
GRAS
153
345
LLDELAAAAKAAEAGNSIGAREILARLNHQLPPLGKPFLRSASYLKEALLLALAEGYHGTCRLTSPLEVALKLAAYKSFSDLSPVLQFTNFTATQALLDEIAGSTASCIHVIDFDLGVGGQWASFLQELAHRRGAGGAALPFVKLTAFVSAASHHPLELRLTRDNIAQFAADLGIPLSSMLSVRIRSILRSSF
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR04G17210
Leersia perrieri
LPERR04G17210
N
0.853
BGIOSGA008764
Oryza indica
BGIOSGA008764
N
0.775
OBART02G26890
Oryza barthii
OBART02G26890
N
0.775
ONIVA02G29390
Oryza nivara
ONIVA02G29390
N
0.775
OPUNC04G18860
Oryza punctata
OPUNC04G18860
N
0.775
ORGLA02G0231600
Oryza glaberrima
ORGLA02G0231600
N
0.775
ORUFI02G28330
Oryza rufipogon
ORUFI02G28330
N
0.775
OLONG_010301
Oryza longistaminata
OLONG_010301
N
0.770
OMERI04G17630
Oryza meridionalis
OMERI04G17630
N
0.770
OBART02G26880
Oryza barthii
OBART02G26880
N
0.754
ORUFI02G28320
Oryza rufipogon
ORUFI02G28320
N
0.754
OS02G0662700
Oryza sativa
OS02G0662700
N
0.754