kdm2ba (Takifugu rubripes)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSTRUG00000005276 T168366_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.957 0.957
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		1.000 1.000
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.851 0.851
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.947 0.947
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.809 0.809
BGIBMGA012843
M01907_2.00 		Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN		 PBM
Weirauch et al.(2014)
pTH9239 		0.745 0.745
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000012658 CxxC 46 92
ENSTRUP00000012659 CxxC 46 92
ENSTRUP00000012660 CxxC 1 19

Links

Other CxxC family TFs
Other Takifugu rubripes TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POU2F2 Homo sapiens ENSG00000028277 D
ceh-18 Caenorhabditis elegans WBGene00000441 D
Pou3f3 Mus musculus ENSMUSG00000045515 D
L892_g6561 Steinernema scapterisci L892_g6561 I
ENSVPAG00000010276 Vicugna pacos ENSVPAG00000010276 I
Brh_R009827 Buceros rhinoceros Brh_R009827 I
CAA36119 Xenopus laevis CAA36119 I
Sjc_0006200 Schistosoma japonicum Sjc_0006200 I
D918_02683 Trichuris suis D918_02683 I
GPUH_0002653201 Gongylonema pulchrum GPUH_0002653201 I
L596_g16531 Steinernema carpocapsae L596_g16531 I
L889_g16900 Steinernema feltiae L889_g16900 I
ENSTSYG00000009143 Tarsius syrichta ENSTSYG00000009143 I
L898_g22690 Steinernema monticolum L898_g22690 I
OESDEN_22180 Oesophagostomum dentatum OESDEN_22180 I
SBAD_0000845701 Soboliphyme baturini SBAD_0000845701 I
TELCIR_24859 Teladorsagia circumcincta TELCIR_24859 I
TTRE_0000958901 Trichuris trichiura TTRE_0000958901 I
pou2f1b Danio rerio ENSDARG00000007996 I
pou5f3 Tetraodon nigroviridis ENSTNIG00000003465 I
ENSSARG00000008273 Sorex araneus ENSSARG00000008273 I
POU2F2 Pteropus vampyrus ENSPVAG00000010621 I
POU2F3 Pan troglodytes ENSPTRG00000004391 I
ENSPPYG00000003972 Pongo abelii ENSPPYG00000003972 I
ENSORLG00000014257 Oryzias latipes ENSORLG00000014257 I
pou3f3b Oryzias latipes ENSORLG00000001901 I
ENSMLUG00000001011 Myotis lucifugus ENSMLUG00000001011 I
ENSGMOG00000000005 Gadus morhua ENSGMOG00000000005 I
ENSDORG00000005303 Dipodomys ordii ENSDORG00000005303 I
L893_g4672 Steinernema glaseri L893_g4672 I
ENSDNOG00000046180 Dasypus novemcinctus ENSDNOG00000046180 I
ENSSARG00000004678 Sorex araneus ENSSARG00000004678 N
Hba_13069 Heterorhabditis bacteriophora Hba_13069 N
scaffold518-EXSNAP2012.7 Pristionchus exspectatus scaffold518-EXSNAP2012.7 N