CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

estExt_fgeneshPB_pg.C_70158 *(Phycomyces blakesleeanus)* E2F
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02319 (E2F_TDP)	IPR003316	estExt_fgeneshPB_pg.C_70158	T173828_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TFDP1 M08108_2.00	Homo sapiens	NSGCGGGAAVN	NBTTCCCGCSN	ChIP-seq Mathelier et al.(2014) MA1122.1	0.765	0.765
TFDP1 M09035_2.00	Homo sapiens	VRDDGGCGGGAMDN	NHKTCCCGCCHHYB	Misc Kulakovskiy et al.(2013) TFDP1_HUMAN.H11MO.0.C	0.765	0.765
dpl-1 M09525_2.00	Caenorhabditis elegans	GCGCGYHW	WDRCGCGC	Misc Heinz et al.(2010) cElegans-Adult_modEncode	0.706	0.706
For this family, TFs with SR scores > 0.429* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
estExt_fgeneshPB_pg.C_70158	E2F	113	191	ATKGLRHFSKQVCDKVEAKGVTTYNEVADQLAKDIQALNPGDEHVYDQKNIRRRVYDALNVLMAMNIITKNKKEIKWLG

Links
Other E2F family TFs
Other *Phycomyces blakesleeanus* TFs