Carubv10007256m.g (Capsella rubella)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Carubv10007256m.g T181266_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007256m FAR1 85 177

Links

Other FAR1 family TFs
Other Capsella rubella TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.911
mgf015959m Mimulus guttatus mgf015959m N 0.878
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N 0.767
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N 0.989
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N 1.000
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N 0.933
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N 0.911
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N 0.922
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N 0.744
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.922
Cucsa.099970 Cucumis sativus Cucsa.099970 N 0.933
MDP0000200105 Malus domestica MDP0000200105 N 0.911
MDP0000261311 Malus domestica MDP0000261311 N 0.756
MDP0000308670 Malus domestica MDP0000308670 N 0.933
SapurV1A.0047s0510 Salix purpurea SapurV1A.0047s0510 N 0.744
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N 0.911
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N 0.911
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.978
PK08522.1 Cannabis sativa PK08522.1 N 0.911
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N 0.856
Bo3g034290 Brassica oleracea Bo3g034290 N 0.967
GLYMA01G00321 Glycine max GLYMA01G00321 N 0.922
GLYMA11G09400 Glycine max GLYMA11G09400 N 0.744
GLYMA14G00240 Glycine max GLYMA14G00240 N 0.922
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.889
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.900
POPTR_0011s14880 Populus trichocarpa POPTR_0011s14880 N 0.744
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N 0.933
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.744
FRS5 Arabidopsis thaliana AT4G38180 N 0.956
TCM_007609 Theobroma cacao TCM_007609 N 0.922
FRS5 Vitis vinifera VIT_03s0038g04140 N 0.900
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N 0.767
Cla015971 Citrullus lanatus Cla015971 N 0.944
Pm020704 Prunus mume Pm020704 N 0.933
Pm026968 Prunus mume Pm026968 N 0.744
cassava23399.valid.m1 Manihot esculenta cassava23399.valid.m1 N 0.744
cassava9536.m1 Manihot esculenta cassava9536.m1 N 0.922