CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_195.42
(
Carica papaya
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
evm.TU.supercontig_195.42
T181379_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_195.42
FAR1
97
185
AFYNAYATQVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP
Links
Other
FAR1
family TFs
Other
Carica papaya
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL13
Arabidopsis thaliana
AT4G17230
N
Bo1g052870
Brassica oleracea
Bo1g052870
N
Bra021063
Brassica rapa
Bra021063
N
Bra026237
Brassica rapa
Bra026237
N
SCL13
Arabidopsis lyrata
fgenesh2_kg.7__2586__AT4G17230.1
N
Bostr.30275s0178
Boechera stricta
Bostr.30275s0178
N
Cagra.3356s0014
Capsella grandiflora
Cagra.3356s0014
N
Carubv10004566m.g
Capsella rubella
Carubv10004566m.g
N
Thhalv10024887m.g
Eutrema salsugineum
Thhalv10024887m.g
N