Pavir.Db01105 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Db01105 T181707_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db01105.1.p FAR1 26 118

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH80 Arabidopsis thaliana AT1G35460 D
30074.m001421 Ricinus communis 30074.m001421 I
PK06301.1 Cannabis sativa PK06301.1 I
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I
Cucsa.061590 Cucumis sativus Cucsa.061590 I
mgf002701m Mimulus guttatus mgf002701m I
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I
Carubv10001721m.g Capsella rubella Carubv10001721m.g I
Carubv10010050m.g Capsella rubella Carubv10010050m.g I
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I
MDP0000269890 Malus domestica MDP0000269890 I
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I
BHLH81 Arabidopsis thaliana AT4G09180 I
Bo5g085170 Brassica oleracea Bo5g085170 I
Bo6g043840 Brassica oleracea Bo6g043840 I
Bo8g026850 Brassica oleracea Bo8g026850 I
Bra028088 Brassica rapa Bra028088 I
Bra036760 Brassica rapa Bra036760 I
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I
GLYMA08G26110 Glycine max GLYMA08G26110 I
MTR_4g033295 Medicago truncatula MTR_4g033295 I
Pm004181 Prunus mume Pm004181 I
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I
Solyc11g056650.1 Solanum lycopersicum Solyc11g056650.1 I
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I
TCM_036484 Theobroma cacao TCM_036484 I
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I