Pavir.J20130 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J20130 T181836_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J20130.1.p FAR1 148 228

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N
mgf025666m Mimulus guttatus mgf025666m N
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N
Carubv10007256m.g Capsella rubella Carubv10007256m.g N
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N
mgf015959m Mimulus guttatus mgf015959m N
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N
MDP0000200105 Malus domestica MDP0000200105 N
MDP0000261311 Malus domestica MDP0000261311 N
MDP0000308670 Malus domestica MDP0000308670 N
SapurV1A.0047s0510 Salix purpurea SapurV1A.0047s0510 N
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N
PK08522.1 Cannabis sativa PK08522.1 N
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N
Bo3g034290 Brassica oleracea Bo3g034290 N
GLYMA01G00321 Glycine max GLYMA01G00321 N
GLYMA11G09400 Glycine max GLYMA11G09400 N
GLYMA14G00240 Glycine max GLYMA14G00240 N
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N
POPTR_0011s14880 Populus trichocarpa POPTR_0011s14880 N
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N
FRS5 Arabidopsis thaliana AT4G38180 N
TCM_007609 Theobroma cacao TCM_007609 N
FRS5 Vitis vinifera VIT_03s0038g04140 N
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N
Pm020704 Prunus mume Pm020704 N
Pm026968 Prunus mume Pm026968 N
cassava23399.valid.m1 Manihot esculenta cassava23399.valid.m1 N
cassava9536.m1 Manihot esculenta cassava9536.m1 N
Cucsa.099970 Cucumis sativus Cucsa.099970 N