CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10001648m.g
(
Eutrema salsugineum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Thhalv10001648m.g
T181947_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10001648m
FAR1
23
113
MFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKFGSVRKLRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVV
Links
Other
FAR1
family TFs
Other
Eutrema salsugineum
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HBP1
Homo sapiens
ENSG00000105856
D
0.000
Hbp1
Mus musculus
ENSMUSG00000002996
D
0.000
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.000
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
0.000
Hbp1
Dipodomys ordii
ENSDORG00000010576
I
0.000
HBP1
Echinops telfairi
ENSETEG00000018542
I
0.000
ENSMEUG00000011116
Macropus eugenii
ENSMEUG00000011116
I
0.000
HBP1
Sorex araneus
ENSSARG00000007731
I
0.000
SPOG_05006
Schizosaccharomyces cryophilus
SPOG_05006
N
0.000
GH23191
Drosophila grimshawi
FBgn0130648
N
0.000
Ogr19131
Ophisaurus gracilis
Ogr19131
N
0.000
e_gw1.88.21.1
Fragilariopsis cylindrus
e_gw1.88.21.1
N
0.000
Ocbimv22007316m.g
Octopus bimaculoides
Ocbimv22007316m.g
N
0.000
PredSwiss_ASS2010_3146.2
Pneumocystis carinii
PredSwiss_ASS2010_3146.2
N
0.000
Sjc_0095610
Schistosoma japonicum
Sjc_0095610
N
0.000
Minc03634
Meloidogyne incognita
Minc03634
N
0.000
Minc04648
Meloidogyne incognita
Minc04648
N
0.000
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
N
0.000
PXEA_0001829801
Protopolystoma xenopodis
PXEA_0001829801
N
0.000
RSKR_0000394100
Rhabditophanes kr3021
RSKR_0000394100
N
0.000
PPA10381
Pristionchus pacificus
PPA10381
N
0.000
H101_08199
Trichophyton interdigitale
H101_08199
N
0.000
GLYMA02G25940
Glycine max
GLYMA02G25940
N
0.000
RO3G_14677
Rhizopus oryzae
RO3G_14677
N
0.000
ENSTNIG00000011238
Tetraodon nigroviridis
ENSTNIG00000011238
N
0.000
SOX11
Ornithorhynchus anatinus
ENSOANG00000006361
N
0.000
ENSGMOG00000014613
Gadus morhua
ENSGMOG00000014613
N
0.000
DAPPUDRAFT_346928
Daphnia pulex
DAPPUDRAFT_346928
N
0.000
CaO19.9298
Candida albicans
CaO19.9298
N
0.000
Bra016455
Brassica rapa
Bra016455
N
0.000
Bra012244
Brassica rapa
Bra012244
N
0.000