PK04639.1 (Cannabis sativa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 PK04639.1 T181979_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.875 0.875
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK04639.1 FAR1 127 214

Links

Other FAR1 family TFs
Other Cannabis sativa TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CHGG_09798 Chaetomium globosum CHGG_09798 N
COCC4DRAFT_87358 Bipolaris maydis COCC4DRAFT_87358 N
COCCADRAFT_90976 Bipolaris zeicola COCCADRAFT_90976 N
COCMIDRAFT_81530 Bipolaris oryzae COCMIDRAFT_81530 N
COCSADRAFT_105936 Bipolaris sorokiniana COCSADRAFT_105936 N
COCVIDRAFT_32721 Bipolaris victoriae COCVIDRAFT_32721 N
CTHT_0017920 Chaetomium thermophilum CTHT_0017920 N
MYCFIDRAFT_158158 Pseudocercospora fijiensis MYCFIDRAFT_158158 N
Mycgr3G70082 Zymoseptoria tritici Mycgr3G70082 N
PODANS_5_4070 Podospora anserina PODANS_5_4070 N
SETTUDRAFT_87447 Setosphaeria turcica SETTUDRAFT_87447 N
estExt_Genewise1Plus.C_chr_31365 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_31365 N
gw1.2.32.1 Cochliobolus heterostrophus C5 gw1.2.32.1 N