FOXP1 (Sus scrofa)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSSSCG00000027675 T187081_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.827 1.000
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.827 1.000
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.827 1.000
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.827 1.000
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.827 1.000
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.827 1.000
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.827 1.000
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.827 1.000
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.827 1.000
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.827 1.000
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.751 0.901
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.751 0.901
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.751 0.901
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.751 0.901
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.751 0.901
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.745 0.765
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.745 0.765
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.745 0.765
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.745 0.765
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.679 0.469
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.679 0.469
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.679 0.469
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.679 0.469
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.679 0.469
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.679 0.469
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.679 0.469
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.678 0.469
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.678 0.469
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.678 0.469
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.678 0.469
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.678 0.469
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.678 0.469
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.678 0.469
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.678 0.469
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.665 0.457
Foxc2
M00796_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2013)
pTH3796 		0.665 0.432
FOXC2
M03036_2.00 		Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN		 SELEX
Jolma et al.(2013)
FOXC2_1 		0.665 0.432
FOXC2
M03037_2.00 		Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
FOXC2_2 		0.665 0.432
FOXC2
M03038_2.00 		Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW		 SELEX
Jolma et al.(2013)
FOXC2_3 		0.665 0.432
FOXC2
M04841_2.00 		Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1 		0.665 0.432
FOXC2
M04842_2.00 		Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2 		0.665 0.432
FOXC2
M10559_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL14_Q2 		0.665 0.432
FOXC2
M04843_2.00 		Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1 		0.665 0.432
FOXC2
M04844_2.00 		Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2 		0.665 0.432
FOXK2
M08118_2.00 		Homo sapiens
NNRTAAACANN
NNTGTTTAYNN		 ChIP-seq
Mathelier et al.(2014)
MA1103.1 		0.665 0.444
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000027197 Forkhead 243 326

Links

Other Forkhead family TFs
Other Sus scrofa TFs

663 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC216731.3_FG001 Zea mays AC216731.3_FG001 N
AMTR_s00024p00250370 Amborella trichopoda AMTR_s00024p00250370 N
BHLH83 Arabidopsis thaliana AT1G66470 N
BHLH86 Arabidopsis thaliana AT5G37800 N
BGIOSGA002533 Oryza indica BGIOSGA002533 N
BGIOSGA008903 Oryza indica BGIOSGA008903 N
Bo00835s050 Brassica oleracea Bo00835s050 N
Bo6g101000 Brassica oleracea Bo6g101000 N
Bra019708 Brassica rapa Bra019708 N
BRADI1G42440 Brachypodium distachyon BRADI1G42440 N
BRADI2G01000 Brachypodium distachyon BRADI2G01000 N
BRADI3G53060 Brachypodium distachyon BRADI3G53060 N
F775_02947 Aegilops tauschii F775_02947 N
F775_03185 Aegilops tauschii F775_03185 N
F775_23458 Aegilops tauschii F775_23458 N
F775_25020 Aegilops tauschii F775_25020 N
F775_43492 Aegilops tauschii F775_43492 N
RSL1 Arabidopsis lyrata fgenesh2_kg.7__3192__AT5G37800.1 N
GLYMA02G41370 Glycine max GLYMA02G41370 N
GLYMA11G33840 Glycine max GLYMA11G33840 N
GLYMA14G07590 Glycine max GLYMA14G07590 N
GLYMA18G04420 Glycine max GLYMA18G04420 N
GRMZM2G066057 Zea mays GRMZM2G066057 N
GSMUA_Achr10G20230_001 Musa acuminata GSMUA_Achr10G20230_001 N
GSMUA_Achr2G22860_001 Musa acuminata GSMUA_Achr2G22860_001 N
GSMUA_Achr3G01250_001 Musa acuminata GSMUA_Achr3G01250_001 N
GSMUA_Achr6G09370_001 Musa acuminata GSMUA_Achr6G09370_001 N
LPERR01G00690 Leersia perrieri LPERR01G00690 N
LPERR02G24230 Leersia perrieri LPERR02G24230 N
MLOC_37511 Hordeum vulgare MLOC_37511 N
MTR_5g079500 Medicago truncatula MTR_5g079500 N
OB0081G10010 Oryza brachyantha OB0081G10010 N
OB01G10850 Oryza brachyantha OB01G10850 N
OB02G36990 Oryza brachyantha OB02G36990 N
OBART01G00850 Oryza barthii OBART01G00850 N
OBART02G29800 Oryza barthii OBART02G29800 N
OGLUM01G00830 Oryza glumaepatula OGLUM01G00830 N
OGLUM02G30450 Oryza glumaepatula OGLUM02G30450 N
OLONG_010619 Oryza longistaminata OLONG_010619 N
OMERI01G00290 Oryza meridionalis OMERI01G00290 N
OMERI02G28660 Oryza meridionalis OMERI02G28660 N
ONIVA01G00780 Oryza nivara ONIVA01G00780 N
ONIVA02G32560 Oryza nivara ONIVA02G32560 N
OPUNC01G00700 Oryza punctata OPUNC01G00700 N
OPUNC02G27370 Oryza punctata OPUNC02G27370 N
ORGLA01G0007400 Oryza glaberrima ORGLA01G0007400 N
ORGLA02G0253300 Oryza glaberrima ORGLA02G0253300 N
ORUFI02G31420 Oryza rufipogon ORUFI02G31420 N
OS01G0111500 Oryza sativa OS01G0111500 N
OS02G0710300 Oryza sativa OS02G0710300 N
PGSC0003DMG400030650 Solanum tuberosum PGSC0003DMG400030650 N
POPTR_0004s08770 Populus trichocarpa POPTR_0004s08770 N
POPTR_0005s14360 Populus trichocarpa POPTR_0005s14360 N
PRUPE_ppa025775mg Prunus persica PRUPE_ppa025775mg N
Sb03g008290 Sorghum bicolor Sb03g008290 N
Sb04g030230 Sorghum bicolor Sb04g030230 N
RHD6 Arabidopsis lyrata scaffold_201372.1 N
SELMODRAFT_409967 Selaginella moellendorffii SELMODRAFT_409967 N
SELMODRAFT_413232 Selaginella moellendorffii SELMODRAFT_413232 N
SELMODRAFT_414414 Selaginella moellendorffii SELMODRAFT_414414 N
SELMODRAFT_418491 Selaginella moellendorffii SELMODRAFT_418491 N
SELMODRAFT_423809 Selaginella moellendorffii SELMODRAFT_423809 N
SELMODRAFT_426794 Selaginella moellendorffii SELMODRAFT_426794 N
Si004720m.g Setaria italica Si004720m.g N
Si019575m.g Setaria italica Si019575m.g N
Solyc02g091440.1 Solanum lycopersicum Solyc02g091440.1 N
TCM_019210 Theobroma cacao TCM_019210 N
Traes_3AS_0D78930B4 Triticum aestivum Traes_3AS_0D78930B4 N
TRAES3BF060500180CFD_g Triticum aestivum TRAES3BF060500180CFD_g N
Traes_6BL_9B25E6A10 Triticum aestivum Traes_6BL_9B25E6A10 N
Traes_6BL_A964BE52B Triticum aestivum Traes_6BL_A964BE52B N
Traes_6DL_3DCFAB31F Triticum aestivum Traes_6DL_3DCFAB31F N
Traes_7BS_A0A8B25DF Triticum aestivum Traes_7BS_A0A8B25DF N
Traes_7DS_4053B6E88 Triticum aestivum Traes_7DS_4053B6E88 N
TRIUR3_11692 Triticum urartu TRIUR3_11692 N
TRIUR3_14379 Triticum urartu TRIUR3_14379 N
TRIUR3_27166 Triticum urartu TRIUR3_27166 N
VIT_14s0006g01470 Vitis vinifera VIT_14s0006g01470 N
Ca_16136 Cicer arietinum Ca_16136 N
Cla020067 Citrullus lanatus Cla020067 N
Pm014359 Prunus mume Pm014359 N
28609.m000209 Ricinus communis 28609.m000209 N
cassava10199.m1 Manihot esculenta cassava10199.m1 N
Cucsa.006340 Cucumis sativus Cucsa.006340 N
estExt_fgenesh1_pg.C_1470079 Physcomitrella patens estExt_fgenesh1_pg.C_1470079 N
estExt_fgenesh1_pg.C_840011 Physcomitrella patens estExt_fgenesh1_pg.C_840011 N
mgf025678m Mimulus guttatus mgf025678m N
Aquca_041_00164 Aquilegia coerulea Aquca_041_00164 N
Bostr.26959s0271 Boechera stricta Bostr.26959s0271 N
Bostr.9638s0100 Boechera stricta Bostr.9638s0100 N
Cagra.2629s0001 Capsella grandiflora Cagra.2629s0001 N
Cagra.8123s0001 Capsella grandiflora Cagra.8123s0001 N
Carubv10007389m.g Capsella rubella Carubv10007389m.g N
Carubv10021322m.g Capsella rubella Carubv10021322m.g N
Ciclev10013420m.g Citrus clementina Ciclev10013420m.g N
Eucgr.F02831 Eucalyptus grandis Eucgr.F02831 N
evm.TU.contig_27490 Carica papaya evm.TU.contig_27490 N
gene17937-v1.0-hybrid Fragaria vesca gene17937-v1.0-hybrid N
Gorai.001G086800 Gossypium raimondii Gorai.001G086800 N
Gorai.004G064400 Gossypium raimondii Gorai.004G064400 N
Lus10017634.g Linum usitatissimum Lus10017634.g N
Lus10033592.g Linum usitatissimum Lus10033592.g N
MDP0000435722 Malus domestica MDP0000435722 N
orange1.1g038918m.g Citrus sinensis orange1.1g038918m.g N
Pavir.Aa00611 Panicum virgatum Pavir.Aa00611 N
Pavir.Db01008 Panicum virgatum Pavir.Db01008 N
Pavir.Eb00817 Panicum virgatum Pavir.Eb00817 N
Pavir.J04215 Panicum virgatum Pavir.J04215 N
Pavir.J20533 Panicum virgatum Pavir.J20533 N
SapurV1A.0102s0280 Salix purpurea SapurV1A.0102s0280 N
SapurV1A.0230s0340 Salix purpurea SapurV1A.0230s0340 N
Thhalv10018927m.g Eutrema salsugineum Thhalv10018927m.g N
Thhalv10028239m.g Eutrema salsugineum Thhalv10028239m.g N