gw1.4.1133.1 (Mucor circinelloides)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 gw1.4.1133.1 T189353_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.743 0.692
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.743 0.692
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.743 0.692
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.743 0.692
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.743 0.692
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.743 0.692
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.743 0.692
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.743 0.692
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.743 0.692
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.743 0.692
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.743 0.692
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.743 0.692
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.743 0.692
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.743 0.692
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.743 0.692
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.739 0.679
Foxj2
M00790_2.00 		Mus musculus
VHMAAYANN
NNTRTTKDB		 PBM
Weirauch et al.(2013)
pTH3043 		0.734 0.705
Foxj2
M01980_2.00 		Mus musculus
RTAAACAN
NTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6638 		0.734 0.705
FOXJ2
M03016_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ2_1 		0.734 0.705
FOXJ2
M03017_2.00 		Homo sapiens
RTAAACAH
DTGTTTAY		 SELEX
Jolma et al.(2013)
FOXJ2_2 		0.734 0.705
FOXJ2
M03018_2.00 		Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ2_3 		0.734 0.705
FOXJ2
M04809_2.00 		Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN		 SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX 		0.734 0.705
FOXJ2
M09084_2.00 		Homo sapiens
WARAYAAAYA
TRTTTRTYTW		 Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C 		0.734 0.705
Foxj2
M09100_2.00 		Mus musculus
WARAYAAAYA
TRTTTRTYTW		 Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C 		0.734 0.705
FOXJ2
M10527_2.00 		Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD		 Transfac
Matys et al.(2006)
V$FOXJ2_01 		0.734 0.705
FOXJ2
M10528_2.00 		Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB		 Transfac
Matys et al.(2006)
V$FOXJ2_02 		0.734 0.705
FOXJ2
M04810_2.00 		Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN		 SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX 		0.734 0.705
HCM1
M00044_2.00 		Saccharomyces cerevisiae
NRWHAACAN
NTGTTDWYN		 PBM
Badis et al.(2008)
HCM1_2157 		0.682 0.551
HCM1
M07473_2.00 		Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0317.1 		0.682 0.551
HCM1
M08554_2.00 		Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB		 Misc
DeBoer et al.(2011)
YCR065W_570 		0.682 0.551
SPU_025010
M01988_2.00 		Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN		 PBM
Weirauch et al.(2014)
pTH6641 		0.677 0.628
Foxk1
M00163_2.00 		Mus musculus
RWMAACAA
TTGTTKWY		 PBM
Badis et al.(2009)
Foxk1_2323 		0.670 0.628
Foxk1
M03061_2.00 		Mus musculus
CGGACACAATC
GATTGTGTCCG		 SELEX
Jolma et al.(2013)
Foxk1_1 		0.670 0.628
Foxk1
M03062_2.00 		Mus musculus
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
Foxk1_2 		0.670 0.628
Foxk1
M09113_2.00 		Mus musculus
NNGDMAACAVV
BBTGTTKHCNN		 Misc
Kulakovskiy et al.(2013)
FOXK1_MOUSE.H11MO.0.A 		0.670 0.628
FOXK1
M01977_2.00 		Homo sapiens
NNRWMMAYAN
NTRTKKWYNN		 PBM
Weirauch et al.(2014)
pTH6108 		0.670 0.615
FOXK1
M03025_2.00 		Homo sapiens
CGGACACAAT
ATTGTGTCCG		 SELEX
Jolma et al.(2013)
FOXK1_1 		0.670 0.615
FOXK1
M04825_2.00 		Homo sapiens
NDNRTMAAYAN
NTRTTKAYNHN		 SELEX
Yin et al.(2017)
FOXK1_eDBD_HT-SELEX 		0.670 0.615
FOXK1
M08120_2.00 		Homo sapiens
NNNGTAAACANVNN
NNBNTGTTTACNNN		 ChIP-seq
Mathelier et al.(2014)
MA0852.2 		0.670 0.615
FOXK1
M09094_2.00 		Homo sapiens
VNDRDAAACA
TGTTTHYHNB		 Misc
Kulakovskiy et al.(2013)
FOXK1_HUMAN.H11MO.0.A 		0.670 0.615
FOXK1
M04826_2.00 		Homo sapiens
NWYRYAAWYAD
HTRWTTRYRWN		 SELEX
Yin et al.(2017)
FOXK1_eDBD_Methyl-HT-SELEX 		0.670 0.615
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.4.1133.1 Forkhead 1 78

Links

Other Forkhead family TFs
Other Mucor circinelloides TFs

351 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_120.27 Carica papaya evm.TU.supercontig_120.27 N
Traes_3B_D6EA106A51 Triticum aestivum Traes_3B_D6EA106A51 N
TRAES3BF030500010CFD_g Triticum aestivum TRAES3BF030500010CFD_g N
TRAES3BF030600030CFD_g Triticum aestivum TRAES3BF030600030CFD_g N
VIT_08s0058g00110 Vitis vinifera VIT_08s0058g00110 N
Ca_09396 Cicer arietinum Ca_09396 N
Cla018363 Citrullus lanatus Cla018363 N
Pm002868 Prunus mume Pm002868 N
cassava41569.m1 Manihot esculenta cassava41569.m1 N
Cucsa.130030 Cucumis sativus Cucsa.130030 N
mg005373m Mimulus guttatus mg005373m N
Aquca_045_00179 Aquilegia coerulea Aquca_045_00179 N
Bostr.6251s0101 Boechera stricta Bostr.6251s0101 N
Cagra.4082s0011 Capsella grandiflora Cagra.4082s0011 N
Ciclev10013640m.g Citrus clementina Ciclev10013640m.g N
TCM_021641 Theobroma cacao TCM_021641 N
gene13480-v1.0-hybrid Fragaria vesca gene13480-v1.0-hybrid N
Gorai.012G117300 Gossypium raimondii Gorai.012G117300 N
Lus10002213.g Linum usitatissimum Lus10002213.g N
Lus10003386.g Linum usitatissimum Lus10003386.g N
MDP0000178778 Malus domestica MDP0000178778 N
MDP0000436338 Malus domestica MDP0000436338 N
orange1.1g039972m.g Citrus sinensis orange1.1g039972m.g N
Pavir.Ea03297 Panicum virgatum Pavir.Ea03297 N
Pavir.J06869 Panicum virgatum Pavir.J06869 N
SapurV1A.0001s0420 Salix purpurea SapurV1A.0001s0420 N
SapurV1A.0905s0090 Salix purpurea SapurV1A.0905s0090 N
Thhalv10012562m.g Eutrema salsugineum Thhalv10012562m.g N
LjSGA_012662.1 Lotus japonicus LjSGA_012662.1 N
OBART01G36050 Oryza barthii OBART01G36050 N
BGIOSGA004736 Oryza indica BGIOSGA004736 N
Bo2g001330 Brassica oleracea Bo2g001330 N
Bra028895 Brassica rapa Bra028895 N
BRADI2G54030 Brachypodium distachyon BRADI2G54030 N
APTX Arabidopsis lyrata fgenesh2_kg.6__80__AT5G01310.1 N
GLYMA01G30660 Glycine max GLYMA01G30660 N
GLYMA03G06792 Glycine max GLYMA03G06792 N
GLYMA0732S00200 Glycine max GLYMA0732S00200 N
GLYMA07G18651 Glycine max GLYMA07G18651 N
GRMZM2G397518 Zea mays GRMZM2G397518 N
GSMUA_Achr4G18820_001 Musa acuminata GSMUA_Achr4G18820_001 N
LPERR01G31030 Leersia perrieri LPERR01G31030 N
MLOC_54157 Hordeum vulgare MLOC_54157 N
MTR_7g069590 Medicago truncatula MTR_7g069590 N
AT5G01305 Arabidopsis thaliana AT5G01305 N
OGLUM01G39950 Oryza glumaepatula OGLUM01G39950 N
OMERI01G33130 Oryza meridionalis OMERI01G33130 N
ONIVA01G41030 Oryza nivara ONIVA01G41030 N
OPUNC01G34850 Oryza punctata OPUNC01G34850 N
ORGLA01G0299600 Oryza glaberrima ORGLA01G0299600 N
ORGLA06G0253200 Oryza glaberrima ORGLA06G0253200 N
ORUFI01G39410 Oryza rufipogon ORUFI01G39410 N
LAX Oryza sativa OS01G0831000 N
POPTR_0006s10350 Populus trichocarpa POPTR_0006s10350 N
POPTR_0016s12830 Populus trichocarpa POPTR_0016s12830 N
Sb03g038820 Sorghum bicolor Sb03g038820 N
Si004520m.g Setaria italica Si004520m.g N
Solyc09g005070.1 Solanum lycopersicum Solyc09g005070.1 N