GLYMA05G05320 (Glycine max)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GLYMA05G05320 T193470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.972
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G05320.1 GATA 7 42

Links

Other GATA family TFs
Other Glycine max TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N
Cla021714 Citrullus lanatus Cla021714 N
29709.m001180 Ricinus communis 29709.m001180 N
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N
Cucsa.256710 Cucumis sativus Cucsa.256710 N
mgf005560m Mimulus guttatus mgf005560m N
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N
Carubv10025047m.g Capsella rubella Carubv10025047m.g N
Ca_06795 Cicer arietinum Ca_06795 N
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N
MDP0000557282 Malus domestica MDP0000557282 N
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N
PK17306.1 Cannabis sativa PK17306.1 N
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N
GRMZM5G850092 Zea mays GRMZM5G850092 N
Bo3g037360 Brassica oleracea Bo3g037360 N
Bo4g023990 Brassica oleracea Bo4g023990 N
Bra000360 Brassica rapa Bra000360 N
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N
GLYMA08G05630 Glycine max GLYMA08G05630 N
GLYMA09G38050 Glycine max GLYMA09G38050 N
GLYMA18G48343 Glycine max GLYMA18G48343 N
GLYMA19G29640 Glycine max GLYMA19G29640 N
GRMZM2G379179 Zea mays GRMZM2G379179 N
AT2G44730 Arabidopsis thaliana AT2G44730 N
MTR_4g117990 Medicago truncatula MTR_4g117990 N
MTR_7g081190 Medicago truncatula MTR_7g081190 N
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N
TCM_005773 Theobroma cacao TCM_005773 N
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N
Ca_06067 Cicer arietinum Ca_06067 N