SKUD_150104 (Saccharomyces kudriavzevii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 SKUD_150104 T195237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM23
M00054_2.00 		Saccharomyces cerevisiae
DAGATCYV
BRGATCTH		 PBM
Badis et al.(2008)
ECM23_2123 		0.856 0.972
ECM23
M07483_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0293.1 		0.856 0.972
ECM23
M08566_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 Misc
DeBoer et al.(2011)
YPL021W_578 		0.856 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42004 GATA 132 167

Links

Other GATA family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006948 Oryza indica BGIOSGA006948 N
BRADI3G07160 Brachypodium distachyon BRADI3G07160 N
F775_22144 Aegilops tauschii F775_22144 N
GRMZM2G143433 Zea mays GRMZM2G143433 N
MLOC_76302 Hordeum vulgare MLOC_76302 N
OGLUM02G07430 Oryza glumaepatula OGLUM02G07430 N
OMERI02G08460 Oryza meridionalis OMERI02G08460 N
ONIVA01G45020 Oryza nivara ONIVA01G45020 N
OPUNC06G18940 Oryza punctata OPUNC06G18940 N
ORGLA02G0069300 Oryza glaberrima ORGLA02G0069300 N
ORUFI02G07490 Oryza rufipogon ORUFI02G07490 N
OS02G0197300 Oryza sativa OS02G0197300 N
Traes_6AS_74635BB63 Triticum aestivum Traes_6AS_74635BB63 N
Traes_7DL_44FCA17C4 Triticum aestivum Traes_7DL_44FCA17C4 N
TRIUR3_31464 Triticum urartu TRIUR3_31464 N
Pavir.J22770 Panicum virgatum Pavir.J22770 N