med-2 (Caenorhabditis elegans)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 WBGene00003181 T195710_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
med-2
M00669_2.00		 Caenorhabditis elegans
NGKATACYNN
NNRGTATMCN		 PBM
Narasimhan et al.(2015)
pTH10768		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00669_2.00 GATA 51 86

DNA Binding Domains

Protein ID Domain From To Sequence
K04C2.6 GATA 114 149

Links

Other GATA family TFs
Other Caenorhabditis elegans TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL8 Arabidopsis thaliana AT5G52510 N
Bo2g047700 Brassica oleracea Bo2g047700 N
Bo9g083130 Brassica oleracea Bo9g083130 N
Bra028312 Brassica rapa Bra028312 N
fgenesh2_kg.205__1__AT5G52510.1 Arabidopsis lyrata fgenesh2_kg.205__1__AT5G52510.1 N
fgenesh2_kg.8__1135__AT5G52510.1 Arabidopsis lyrata fgenesh2_kg.8__1135__AT5G52510.1 N
Bostr.7305s0021 Boechera stricta Bostr.7305s0021 N
Cagra.4170s0002 Capsella grandiflora Cagra.4170s0002 N
Carubv10026035m.g Capsella rubella Carubv10026035m.g N
Thhalv10012936m.g Eutrema salsugineum Thhalv10012936m.g N