SapurV1A.0254s0200 (Salix purpurea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 SapurV1A.0254s0200 T196795_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0254s0200.1.p GATA 137 172

Links

Other GATA family TFs
Other Salix purpurea TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.000
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.000
PK09783.1 Cannabis sativa PK09783.1 I 0.000
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.000
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.000
MDP0000147745 Malus domestica MDP0000147745 I 0.000
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.000
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.000
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.000
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.000
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.000
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.000
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.000
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.000
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.000
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.000
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.000
28779.m000140 Ricinus communis 28779.m000140 I 0.000
Cla017983 Citrullus lanatus Cla017983 I 0.000
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.000
TCM_022516 Theobroma cacao TCM_022516 I 0.000
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.000
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.000
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.000
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.000
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.000
Bra025743 Brassica rapa Bra025743 I 0.000
Bo5g027510 Brassica oleracea Bo5g027510 I 0.000