CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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wc-2
(
Neurospora crassa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
NCU00902
T196897_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.802
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02016_2.00
GATA
52
87
CTDCGTLDSPEWRKGPSGPKTLCNACGLRWAKKEKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00902
GATA
468
503
CTDCGTLDSPEWRKGPSGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Neurospora crassa
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB42
Homo sapiens
ENSG00000179627
D
0.000
zbtb42
Oryzias latipes
ENSORLG00000017008
I
0.000
znf238.2
Xenopus tropicalis
XB-GENE-1219066
I
0.000
Ogr11588
Ophisaurus gracilis
Ogr11588
I
0.000
ENSP00000409107
Macaca fascicularis
ENSP00000409107
I
0.000
Alligator_sinensis_CCG020881.1
Alligator sinensis
Alligator_sinensis_CCG020881.1
I
0.000
ENSXMAG00000006703
Xiphophorus maculatus
ENSXMAG00000006703
I
0.000
zbtb42
Takifugu rubripes
ENSTRUG00000013592
I
0.000
zbtb42
Tetraodon nigroviridis
ENSTNIG00000000917
I
0.000
ENSSHAG00000008534
Sarcophilus harrisii
ENSSHAG00000008534
I
0.000
ZBTB42
Pan troglodytes
ENSPTRG00000040287
I
0.000
ENSPFOG00000010298
Poecilia formosa
ENSPFOG00000010298
I
0.000
ZBTB42
Anolis carolinensis
ENSACAG00000011451
I
0.000
ENSONIG00000012149
Oreochromis niloticus
ENSONIG00000012149
I
0.000
ZBTB42
Monodelphis domestica
ENSMODG00000013701
I
0.000
ZBTB42
Meleagris gallopavo
ENSMGAG00000015389
I
0.000
ENSLOCG00000012759
Lepisosteus oculatus
ENSLOCG00000012759
I
0.000
ZBTB42
Gallus gallus
ENSGALG00000023025
I
0.000
zbtb42
Gasterosteus aculeatus
ENSGACG00000006297
I
0.000
zbtb42
Danio rerio
ENSDARG00000102761
I
0.000
ENSCSAG00000019588
Chlorocebus sabaeus
ENSCSAG00000019588
I
0.000
ENSAMEG00000007755
Ailuropoda melanoleuca
ENSAMEG00000007755
I
0.000