SMAR000355 (Strigamia maritima)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 SMAR000355 T199445_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
grh
M06209_2.00 		Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK		 B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211 		0.712 0.712
grh
M10616_2.00 		Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN		 Transfac
Matys et al.(2006)
I$ELF1_01 		0.712 0.712
grh
M10617_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$GRH_01 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR000355-PA Grainyhead 249 473

Links

Other Grainyhead family TFs
Other Strigamia maritima TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.0568s0468 Boechera stricta Bostr.0568s0468 N 0.000
Thhalv10003624m.g Eutrema salsugineum Thhalv10003624m.g N 0.000
SapurV1A.0841s0060 Salix purpurea SapurV1A.0841s0060 N 0.000
SapurV1A.0168s0020 Salix purpurea SapurV1A.0168s0020 N 0.000
MDP0000574910 Malus domestica MDP0000574910 N 0.000
MDP0000313526 Malus domestica MDP0000313526 N 0.000
Lus10016758.g Linum usitatissimum Lus10016758.g N 0.000
Gorai.001G059600 Gossypium raimondii Gorai.001G059600 N 0.000
gene06360-v1.0-hybrid Fragaria vesca gene06360-v1.0-hybrid N 0.000
gene06358-v1.0-hybrid Fragaria vesca gene06358-v1.0-hybrid N 0.000
Carubv10027519m.g Capsella rubella Carubv10027519m.g N 0.000
Cagra.0248s0020 Capsella grandiflora Cagra.0248s0020 N 0.000
emb2746 Arabidopsis thaliana AT5G63420 N 0.000
mgf010338m Mimulus guttatus mgf010338m N 0.000
Cucsa.157420 Cucumis sativus Cucsa.157420 N 0.000
Pm024489 Prunus mume Pm024489 N 0.000
Cla019560 Citrullus lanatus Cla019560 N 0.000
emb2746 Vitis vinifera VIT_17s0000g01640 N 0.000
PRUPE_ppa001238mg Prunus persica PRUPE_ppa001238mg N 0.000
POPTR_0012s09780 Populus trichocarpa POPTR_0012s09780 N 0.000
GSMUA_Achr9G29430_001 Musa acuminata GSMUA_Achr9G29430_001 N 0.000
GLYMA06G17980 Glycine max GLYMA06G17980 N 0.000
Bra038629 Brassica rapa Bra038629 N 0.000
Bo3g103450 Brassica oleracea Bo3g103450 N 0.000