CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tetur01g12650
(
Tetranychus urticae
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
tetur01g12650
T199458_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.766
0.766
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.766
0.766
grh
M10617_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
tetur01g12650.1
Grainyhead
212
430
SGGKRSWNEYNRNSEVDKVQIPKIFSDVGYKYYLESPISTSQRREDDRITYINKGQFYGITLEYIPDAGNPLKSATVKSLVLLVFREEKLHEDEIKAWQFWHSRQHSVKQRILDADTKNSSGIIGPIEEVTHNSIAFYWNPLEGPAKINVAVQCLSTDFSNQKGVKGLPLHLQIDTFDDFRDGSLPIHRGYCQIKVFCDKGAERKTRDEERRAAKRKLT
Links
Other
Grainyhead
family TFs
Other
Tetranychus urticae
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
grh
Drosophila melanogaster
FBgn0259211
D
0.766
GB46725
Apis mellifera
GB46725
I
0.734
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.769
MDOA000476
Musca domestica
MDOA000476
I
0.766
LLOJ002492
Lutzomyia longipalpis
LLOJ002492
I
0.711
Hsal_11404--XP_394553.3_APIME
Harpegnathos saltator
Hsal_11404--XP_394553.3_APIME
I
0.720
Cflo_10585--XP_394553.3_APIME
Camponotus floridanus
Cflo_10585--XP_394553.3_APIME
I
0.729
YQE_09165
Dendroctonus ponderosae
YQE_09165
I
0.757
TC004589
Tribolium castaneum
TC004589
I
0.766
SMAR000355
Strigamia maritima
SMAR000355
I
0.752
SINV20218
Solenopsis invicta
SINV20218
I
0.714
RPRC012881
Rhodnius prolixus
RPRC012881
I
0.734
NV11321
Nasonia vitripennis
NV11321
I
0.720
MCINX002723
Melitaea cinxia
MCINX002723
I
0.734
KGM_04625
Danaus plexippus
KGM_04625
I
0.739
ISCW008081
Ixodes scapularis
ISCW008081
I
0.830
HMEL013326
Heliconius melpomene
HMEL013326
I
0.761
AAEL000577
Aedes aegypti
AAEL000577
I
0.794
GA30279
Drosophila pseudoobscura
FBgn0263821
I
0.766
GK22232
Drosophila willistoni
FBgn0224217
I
0.761
GD11322
Drosophila simulans
FBgn0183071
I
0.766
GM21828
Drosophila sechellia
FBgn0176705
I
0.766
GL17227
Drosophila persimilis
FBgn0154830
I
0.766
GI19118
Drosophila mojavensis
FBgn0141857
I
0.763
GH22029
Drosophila grimshawi
FBgn0129490
I
0.766
GG21828
Drosophila erecta
FBgn0114006
I
0.766
GF11678
Drosophila ananassae
FBgn0088718
I
0.766
grh
Drosophila yakuba
FBgn0067967
I
0.766
DAPPUDRAFT_64332
Daphnia pulex
DAPPUDRAFT_64332
I
0.716
AGAP005564
Anopheles gambiae
AGAP005564
I
0.784
ACYPI29050
Acyrthosiphon pisum
ACYPI29050
I
0.757