CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI05G18690
(
Oryza meridionalis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OMERI05G18690
T200801_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI05G18690.1
GRAS
109
479
MIALLMECAVAMSVGNLAGANGALLELSQMASPYAPSCGERLVAYFARAMAARLVGSWVGVAAPLAPPPPPRAAAINAAFRALYNVAPFARLAYLACNQAILEAFHGKRLVHIVDLDVVPGGALQWLSLLPALAARPGGPPAIRVTGFGMSASVLHDAGNQLAGLARKLCMSFEFYAVAKRPGDADAVADVPGRRPGEAVAVHWLRHAMYDAAGDDGTAMRLVRWLEPTAVTLVEQERAHGGDGGHGRFLDRFVSALHHYSAVFDAMGASRPDGEDASRHLAEHGVLGREIANVLAVGGPARSSGRERPGSWREVLPRHGFAHAGGGGGGRAQLVAAACPGGLGYTVAGDHDGTVRLGWKGTPLYAVSAWA
Links
Other
GRAS
family TFs
Other
Oryza meridionalis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC029
Arabidopsis thaliana
AT1G69490
D
Traes_5BL_CC18CAD72
Triticum aestivum
Traes_5BL_CC18CAD72
D
Cagra.0887s0008
Capsella grandiflora
Cagra.0887s0008
I
Carubv10020776m.g
Capsella rubella
Carubv10020776m.g
I
Bostr.10273s0418
Boechera stricta
Bostr.10273s0418
I
Aquca_002_00663
Aquilegia coerulea
Aquca_002_00663
I
mgf022118m
Mimulus guttatus
mgf022118m
I
mgf016848m
Mimulus guttatus
mgf016848m
I
cassava1317.valid.m1
Manihot esculenta
cassava1317.valid.m1
I
29813.m001519
Ricinus communis
29813.m001519
I
Pm006470
Prunus mume
Pm006470
I
Cla010367
Citrullus lanatus
Cla010367
I
Ca_18090
Cicer arietinum
Ca_18090
I
Ca_16379
Cicer arietinum
Ca_16379
I
NAP
Vitis vinifera
VIT_01s0026g02710
I
TCM_011671
Theobroma cacao
TCM_011671
I
Solyc05g007770.2
Solanum lycopersicum
Solyc05g007770.2
I
Solyc04g005610.2
Solanum lycopersicum
Solyc04g005610.2
I
Si026530m.g
Setaria italica
Si026530m.g
I
Si010410m.g
Setaria italica
Si010410m.g
I
Sb08g001940
Sorghum bicolor
Sb08g001940
I
Lus10037156.g
Linum usitatissimum
Lus10037156.g
I
chr2.CM0641.320.nc
Lotus japonicus
chr2.CM0641.320.nc
I
PK25119.1
Cannabis sativa
PK25119.1
I
Thhalv10018997m.g
Eutrema salsugineum
Thhalv10018997m.g
I
SapurV1A.0801s0090
Salix purpurea
SapurV1A.0801s0090
I
SapurV1A.0063s0620
Salix purpurea
SapurV1A.0063s0620
I
SapurV1A.0063s0610
Salix purpurea
SapurV1A.0063s0610
I
Pavir.J23516
Panicum virgatum
Pavir.J23516
I
orange1.1g023197m.g
Citrus sinensis
orange1.1g023197m.g
I
MDP0000481448
Malus domestica
MDP0000481448
I
MDP0000262990
Malus domestica
MDP0000262990
I
Sb05g001580
Sorghum bicolor
Sb05g001580
I
Lus10036773.g
Linum usitatissimum
Lus10036773.g
I
Lus10030446.g
Linum usitatissimum
Lus10030446.g
I
Lus10026617.g
Linum usitatissimum
Lus10026617.g
I
Gorai.008G179900
Gossypium raimondii
Gorai.008G179900
I
Gorai.005G142300
Gossypium raimondii
Gorai.005G142300
I
evm.TU.supercontig_1.48
Carica papaya
evm.TU.supercontig_1.48
I
Eucgr.G02486
Eucalyptus grandis
Eucgr.G02486
I
Eucgr.B03208
Eucalyptus grandis
Eucgr.B03208
I
Ciclev10032304m.g
Citrus clementina
Ciclev10032304m.g
I
GLYMA02G12220
Glycine max
GLYMA02G12220
I
OB12G11500
Oryza brachyantha
OB12G11500
I
OB11G11210
Oryza brachyantha
OB11G11210
I
MTR_5g041940
Medicago truncatula
MTR_5g041940
I
MTR_4g081870
Medicago truncatula
MTR_4g081870
I
MLOC_4747
Hordeum vulgare
MLOC_4747
I
GSMUA_Achr7G21770_001
Musa acuminata
GSMUA_Achr7G21770_001
I
GSMUA_Achr6G32320_001
Musa acuminata
GSMUA_Achr6G32320_001
I
GLYMA20G04400
Glycine max
GLYMA20G04400
I
GLYMA07G35630
Glycine max
GLYMA07G35630
I
OBART07G19010
Oryza barthii
OBART07G19010
I
GLYMA01G06150
Glycine max
GLYMA01G06150
I
NAP
Arabidopsis lyrata
fgenesh2_kg.2__1206__AT1G69490.1
I
F775_26965
Aegilops tauschii
F775_26965
I
Bra004385
Brassica rapa
Bra004385
I
Bo6g108930
Brassica oleracea
Bo6g108930
I
Bo6g095510
Brassica oleracea
Bo6g095510
I
BGIOSGA036918
Oryza indica
BGIOSGA036918
I
BGIOSGA034713
Oryza indica
BGIOSGA034713
I
ONAC010
Oryza indica
BGIOSGA024071
I
OPUNC12G01370
Oryza punctata
OPUNC12G01370
I
POPTR_0010s17350
Populus trichocarpa
POPTR_0010s17350
I
POPTR_0008s08850
Populus trichocarpa
POPTR_0008s08850
I
PGSC0003DMG400018435
Solanum tuberosum
PGSC0003DMG400018435
I
PGSC0003DMG400002824
Solanum tuberosum
PGSC0003DMG400002824
I
OS11G0126900
Oryza sativa
OS11G0126900
I
ONAC010
Oryza sativa
OS07G0566500
I
ORUFI07G19770
Oryza rufipogon
ORUFI07G19770
I
ORGLA12G0011400
Oryza glaberrima
ORGLA12G0011400
I
ORGLA07G0243600
Oryza glaberrima
ORGLA07G0243600
I
PRUPE_ppa009530mg
Prunus persica
PRUPE_ppa009530mg
I
OPUNC11G01330
Oryza punctata
OPUNC11G01330
I
ONIVA11G01630
Oryza nivara
ONIVA11G01630
I
ONIVA07G17340
Oryza nivara
ONIVA07G17340
I
OMERI12G00480
Oryza meridionalis
OMERI12G00480
I
OGLUM12G01870
Oryza glumaepatula
OGLUM12G01870
I
OGLUM11G01310
Oryza glumaepatula
OGLUM11G01310
I
OGLUM07G18780
Oryza glumaepatula
OGLUM07G18780
I
OBART12G01290
Oryza barthii
OBART12G01290
I
OBART11G01590
Oryza barthii
OBART11G01590
I