Bo6g095510 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo6g095510 T292433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.963 0.973
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.963 0.973
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.963 0.973
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.963 0.973
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g095510.1 NAC/NAM 11 135

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I 0.963
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I 0.963
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I 0.963
Carubv10020776m.g Capsella rubella Carubv10020776m.g I 0.963
NAC029 Arabidopsis thaliana AT1G69490 D 0.963
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I 0.963
Bo6g108930 Brassica oleracea Bo6g108930 I 0.961
Bra004385 Brassica rapa Bra004385 I 0.961
GLYMA07G35630 Glycine max GLYMA07G35630 I 0.944
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.942
GLYMA20G04400 Glycine max GLYMA20G04400 I 0.940
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.940
NAP Vitis vinifera VIT_01s0026g02710 I 0.939
MTR_4g081870 Medicago truncatula MTR_4g081870 I 0.939
PK25119.1 Cannabis sativa PK25119.1 I 0.938
mgf022118m Mimulus guttatus mgf022118m I 0.938
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I 0.938
Lus10036773.g Linum usitatissimum Lus10036773.g I 0.936
29813.m001519 Ricinus communis 29813.m001519 I 0.936
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I 0.935
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I 0.935
Pm006470 Prunus mume Pm006470 I 0.935
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.935
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I 0.934
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I 0.934
MDP0000481448 Malus domestica MDP0000481448 I 0.933
evm.TU.supercontig_1.48 Carica papaya evm.TU.supercontig_1.48 I 0.933
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I 0.931
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I 0.930
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.927
GLYMA01G06150 Glycine max GLYMA01G06150 I 0.927
Cla010367 Citrullus lanatus Cla010367 I 0.927
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I 0.926
MDP0000262990 Malus domestica MDP0000262990 I 0.926
PGSC0003DMG400018435 Solanum tuberosum PGSC0003DMG400018435 I 0.926
GLYMA02G12220 Glycine max GLYMA02G12220 I 0.923
Ca_16379 Cicer arietinum Ca_16379 I 0.920
Solyc05g007770.2 Solanum lycopersicum Solyc05g007770.2 I 0.919
Solyc04g005610.2 Solanum lycopersicum Solyc04g005610.2 I 0.917
TCM_011671 Theobroma cacao TCM_011671 I 0.916
Ca_18090 Cicer arietinum Ca_18090 I 0.914
Aquca_002_00663 Aquilegia coerulea Aquca_002_00663 I 0.903
Eucgr.B03208 Eucalyptus grandis Eucgr.B03208 I 0.903
mgf016848m Mimulus guttatus mgf016848m I 0.897
MTR_5g041940 Medicago truncatula MTR_5g041940 I 0.896
SapurV1A.0063s0620 Salix purpurea SapurV1A.0063s0620 I 0.895
SapurV1A.0063s0610 Salix purpurea SapurV1A.0063s0610 I 0.895
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I 0.889
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.886
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.886
POPTR_0010s17350 Populus trichocarpa POPTR_0010s17350 I 0.879
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.874
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.874