CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC06G18940
(
Oryza punctata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OPUNC06G18940
T200912_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC06G18940.1
GRAS
51
445
TRDLLLACADLLQRGDLPAARRAAEIVLSAAASPRGDGADRLAYHFARALALRADAKAGHVVVGGGGGVAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAAAAAVDAGGAHRRVLHIVDLDAAHGVQWPPLLQAIAERADPALGPPEVRITGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTTPHVAGTSTAATASTAAATTTGLELHPDETLAVNCVLFLHKLGGDGELAAFLKWVKSMNPAVVTIAEREAGGGAGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARGAGFVARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ
Links
Other
GRAS
family TFs
Other
Oryza punctata
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA06G0172100
Oryza glaberrima
ORGLA06G0172100
N
0.874
Pavir.J25515
Panicum virgatum
Pavir.J25515
N
0.725
Pavir.J22770
Panicum virgatum
Pavir.J22770
N
0.716
Pavir.Da00564
Panicum virgatum
Pavir.Da00564
N
0.804
Traes_7DL_44FCA17C4
Triticum aestivum
Traes_7DL_44FCA17C4
N
0.861
Traes_6AS_74635BB63
Triticum aestivum
Traes_6AS_74635BB63
N
0.746
Si008068m.g
Setaria italica
Si008068m.g
N
0.809
Sb10g023950
Sorghum bicolor
Sb10g023950
N
0.792
OS06G0610350
Oryza sativa
OS06G0610350
N
0.812
OS02G0197300
Oryza sativa
OS02G0197300
N
0.708
ORUFI06G22200
Oryza rufipogon
ORUFI06G22200
N
0.880
ORUFI02G07490
Oryza rufipogon
ORUFI02G07490
N
0.711
BGIOSGA006948
Oryza indica
BGIOSGA006948
N
0.710
ORGLA02G0069300
Oryza glaberrima
ORGLA02G0069300
N
0.702
ONIVA06G24530
Oryza nivara
ONIVA06G24530
N
0.877
ONIVA01G45020
Oryza nivara
ONIVA01G45020
N
0.705
OMERI06G21310
Oryza meridionalis
OMERI06G21310
N
0.877
OGLUM06G21860
Oryza glumaepatula
OGLUM06G21860
N
0.855
OB06G28600
Oryza brachyantha
OB06G28600
N
0.928
MLOC_76302
Hordeum vulgare
MLOC_76302
N
0.863
GRMZM2G143433
Zea mays
GRMZM2G143433
N
0.702
GRMZM2G114680
Zea mays
GRMZM2G114680
N
0.829
BRADI1G36180
Brachypodium distachyon
BRADI1G36180
N
0.794
BGIOSGA023255
Oryza indica
BGIOSGA023255
N
0.880