CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC12G02190
(
Oryza punctata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OPUNC12G02190
T200928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC12G02190.1
GRAS
165
545
LRELLLSCAQAVSSGNRRSAGELLEQIKRHSSPTGDATQRLAHYFADGLEARLAGVASLEHRLFAAAERASAMELLEAYQVFMAACCFKWVAFTFANMTILRAAEGRSKLHIVDYGGQYHGLQWPSLLQWLAEREGGPPEVRMTLVGHPQPGFRPARRLERTGRRLSNCARAFGLPFKFRAVAAARWETVTAEDVAGGVDPDDEAIVVNDVLNLGTLMDESGVFDDPSPRDMVLGNIRDMRPAVFVQAVVNGAHGAPFFPTRFREALFFFSALFDMLDATTPKEMSHLRMVLERDVLRRAAVGVIAGEGAERVERPETYRRWQARNRRAGLRQVAVEADVVEAVRRRVRRRHHEEFVIEEDAGWLLQGWKGRILYAHSAWV
Links
Other
GRAS
family TFs
Other
Oryza punctata
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034760
Oryza indica
BGIOSGA034760
N
0.944
BGIOSGA036958
Oryza indica
BGIOSGA036958
N
0.949
OB0044G10270
Oryza brachyantha
OB0044G10270
N
0.862
OBART11G02410
Oryza barthii
OBART11G02410
N
0.914
OBART11G02420
Oryza barthii
OBART11G02420
N
0.933
OGLUM11G02110
Oryza glumaepatula
OGLUM11G02110
N
0.938
OGLUM12G02750
Oryza glumaepatula
OGLUM12G02750
N
0.952
OMERI12G01090
Oryza meridionalis
OMERI12G01090
N
0.941
ONIVA11G02640
Oryza nivara
ONIVA11G02640
N
0.946
ORGLA12G0020400
Oryza glaberrima
ORGLA12G0020400
N
0.949
ORUFI11G02370
Oryza rufipogon
ORUFI11G02370
N
0.884
ORUFI12G02540
Oryza rufipogon
ORUFI12G02540
N
0.889
OS11G0139600
Oryza sativa
OS11G0139600
N
0.904
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.775