CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
29706.m001281
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
29706.m001281
T202009_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29706.m001281
GRAS
163
540
AEDLLNPCAAAVSTGNLSRVQHLLYVLHELASSTGDANHRLAFYGLQALTHHLSSSRTSASIGSVSFTSIDPKFFQRSLLKFYEVSPWFAFPNNIANSSILQVLAQELDHKRNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRITVITATVESDQNTETPFSVGPPGDNFSSRLLNFAKSLNINLQINRLDNHPLQSLNAQVINTNPEDTLVVCAQFRLHHLNHNNPDERTEFLKVLRSLEPKGVILSENNTDRCQICGDFATGFSRRVDYLWKFLDSTSSAFKGRESEERRVMEGEAAKALINCGEMNDGKEKWCERMRDSGFVGEVFGEDTIDGARALLRKYDSNWEMRTEEKDGCVGLWWKGQPVSFCSLWR
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.758
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.741
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.719
TCM_029136
Theobroma cacao
TCM_029136
N
0.760
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.765
Pm013263
Prunus mume
Pm013263
N
0.716
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.795
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.795
Ciclev10027413m.g
Citrus clementina
Ciclev10027413m.g
N
0.737
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.710
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.749
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.722
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.756