Carubv10015685m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10015685m.g T202355_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015685m GRAS 42 405

Links

Other GRAS family TFs
Other Capsella rubella TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.000
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.710
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.000
Si035052m.g Setaria italica Si035052m.g N 0.000
Si035089m.g Setaria italica Si035089m.g N 0.000
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.707
TCM_002319 Theobroma cacao TCM_002319 N 0.732
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.000
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.000
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.000
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.000
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.000
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.000
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.000
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.707
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.000
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.000
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.000
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.000
Pm015021 Prunus mume Pm015021 N 0.707
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.732
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.740
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.737
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.000
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.000
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.000
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.000
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.000
OBART10G07700 Oryza barthii OBART10G07700 N 0.000
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.000
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.000
F775_08653 Aegilops tauschii F775_08653 N 0.000
F775_26780 Aegilops tauschii F775_26780 N 0.000
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.000
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.000
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.000
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.000
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.000
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.000
OB03G16920 Oryza brachyantha OB03G16920 N 0.000
OB10G15940 Oryza brachyantha OB10G15940 N 0.000
OBART03G06740 Oryza barthii OBART03G06740 N 0.000
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.000
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.000
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.000
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.000
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.000
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.000
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.000
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.000
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.000
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.000
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.000
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.000
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.000
OS03G0193000 Oryza sativa OS03G0193000 N 0.000