CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10027926m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10027926m.g
T202413_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10027926m
GRAS
325
696
LWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVICLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWK
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HINFP
Homo sapiens
ENSG00000172273
D
ENSMPUG00000005286
Mustela putorius furo
ENSMPUG00000005286
I
ENSP00000318085
Macaca fascicularis
ENSP00000318085
I
Aan_R014383
Calypte anna
Aan_R014383
I
HINFP
Tursiops truncatus
ENSTTRG00000002809
I
ENSTSYG00000012226
Tarsius syrichta
ENSTSYG00000012226
I
ENSSTOG00000014457
Ictidomys tridecemlineatus
ENSSTOG00000014457
I
HINFP
Sus scrofa
ENSSSCG00000015112
I
ENSSHAG00000009681
Sarcophilus harrisii
ENSSHAG00000009681
I
HINFP
Pteropus vampyrus
ENSPVAG00000005598
I
HINFP
Pan troglodytes
ENSPTRG00000004372
I
ENSPPYG00000003957
Pongo abelii
ENSPPYG00000003957
I
HINFP
Procavia capensis
ENSPCAG00000013133
I
ENSPANG00000005040
Papio anubis
ENSPANG00000005040
I
HINFP
Otolemur garnettii
ENSOGAG00000007304
I
ENSNLEG00000007387
Nomascus leucogenys
ENSNLEG00000007387
I
ENSAMEG00000000033
Ailuropoda melanoleuca
ENSAMEG00000000033
I
HINFP
Macaca mulatta
ENSMMUG00000014877
I
HINFP
Myotis lucifugus
ENSMLUG00000000455
I
HINFP
Microcebus murinus
ENSMICG00000002733
I
ENSMEUG00000015482
Macropus eugenii
ENSMEUG00000015482
I
HINFP
Loxodonta africana
ENSLAFG00000017500
I
HINFP
Gorilla gorilla
ENSGGOG00000008087
I
HINFP
Felis catus
ENSFCAG00000001165
I
HINFP
Equus caballus
ENSECAG00000024938
I
ENSCSAG00000002522
Chlorocebus sabaeus
ENSCSAG00000002522
I
HINFP
Cavia porcellus
ENSCPOG00000006488
I
HINFP
Callithrix jacchus
ENSCJAG00000013942
I
HINFP
Canis familiaris
ENSCAFG00000012224
I
HINFP
Oryctolagus cuniculus
ENSOCUG00000010808
N
HINFP
Dasypus novemcinctus
ENSDNOG00000025019
N