HINFP (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000013133 T105927_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HINFP
M02907_2.00 		Homo sapiens
BVRCGTCCGCNN
NNGCGGACGYBV		 SELEX
Jolma et al.(2013)
HINFP1_1 		0.782 0.985
HINFP
M02908_2.00 		Homo sapiens
GCGGACGYTRSRRCGTCCGC
GCGGACGYYSYARCGTCCGC		 SELEX
Jolma et al.(2013)
HINFP1_2 		0.782 0.985
HINFP
M02909_2.00 		Homo sapiens
GCGGACSBKSVRCGTCCGC
GCGGACGYBSMVSGTCCGC		 SELEX
Jolma et al.(2013)
HINFP1_3 		0.782 0.985
HINFP
M08918_2.00 		Homo sapiens
BWACGTCCGHBDNSNH
DNSNHVDCGGACGTWV		 Misc
Kulakovskiy et al.(2013)
HINFP_HUMAN.H11MO.0.C 		0.782 0.985
HINFP
M10262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIZF_01 		0.782 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000012272 C2H2 ZF 168 191
ENSPCAP00000012272 C2H2 ZF 198 218
ENSPCAP00000012272 C2H2 ZF 227 249
ENSPCAP00000012272 C2H2 ZF 253 276
ENSPCAP00000012272 C2H2 ZF 282 304
ENSPCAP00000012272 C2H2 ZF 343 366

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HINFP Equus caballus ENSECAG00000024938 I 0.827
ENSSTOG00000014457 Ictidomys tridecemlineatus ENSSTOG00000014457 I 0.827
HINFP Loxodonta africana ENSLAFG00000017500 I 0.825
HINFP Microcebus murinus ENSMICG00000002733 I 0.821
HINFP Otolemur garnettii ENSOGAG00000007304 I 0.821
HINFP Myotis lucifugus ENSMLUG00000000455 I 0.817
HINFP Pteropus vampyrus ENSPVAG00000005598 I 0.817
Myotis_brandtii_HINFP_10033522 Myotis brandtii Myotis_brandtii_HINFP_10033522 I 0.817
ENSTSYG00000012226 Tarsius syrichta ENSTSYG00000012226 I 0.811
HINFP Cavia porcellus ENSCPOG00000006488 I 0.808
ENSMEUG00000015482 Macropus eugenii ENSMEUG00000015482 I 0.808
ENSSHAG00000009681 Sarcophilus harrisii ENSSHAG00000009681 I 0.808
Aan_R014383 Calypte anna Aan_R014383 I 0.806
HINFP Oryctolagus cuniculus ENSOCUG00000010808 N 0.784
HINFP Callithrix jacchus ENSCJAG00000013942 I 0.782
ENSCSAG00000002522 Chlorocebus sabaeus ENSCSAG00000002522 I 0.782
HINFP Dasypus novemcinctus ENSDNOG00000025019 N 0.782
HINFP Homo sapiens ENSG00000172273 D 0.782
HINFP Gorilla gorilla ENSGGOG00000008087 I 0.782
HINFP Macaca mulatta ENSMMUG00000014877 I 0.782
ENSNLEG00000007387 Nomascus leucogenys ENSNLEG00000007387 I 0.782
ENSPANG00000005040 Papio anubis ENSPANG00000005040 I 0.782
ENSPPYG00000003957 Pongo abelii ENSPPYG00000003957 I 0.782
HINFP Pan troglodytes ENSPTRG00000004372 I 0.782
ENSP00000318085 Macaca fascicularis ENSP00000318085 I 0.782
HINFP Tursiops truncatus ENSTTRG00000002809 I 0.779
ENSAMEG00000000033 Ailuropoda melanoleuca ENSAMEG00000000033 I 0.776
HINFP Canis familiaris ENSCAFG00000012224 I 0.776
HINFP Felis catus ENSFCAG00000001165 I 0.776
ENSMPUG00000005286 Mustela putorius furo ENSMPUG00000005286 I 0.776
HINFP Sus scrofa ENSSSCG00000015112 I 0.769