HINFP (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000006488 T089850_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HINFP
M02907_2.00 		Homo sapiens
BVRCGTCCGCNN
NNGCGGACGYBV		 SELEX
Jolma et al.(2013)
HINFP1_1 		0.763 0.970
HINFP
M02908_2.00 		Homo sapiens
GCGGACGYTRSRRCGTCCGC
GCGGACGYYSYARCGTCCGC		 SELEX
Jolma et al.(2013)
HINFP1_2 		0.763 0.970
HINFP
M02909_2.00 		Homo sapiens
GCGGACSBKSVRCGTCCGC
GCGGACGYBSMVSGTCCGC		 SELEX
Jolma et al.(2013)
HINFP1_3 		0.763 0.970
HINFP
M08918_2.00 		Homo sapiens
BWACGTCCGHBDNSNH
DNSNHVDCGGACGTWV		 Misc
Kulakovskiy et al.(2013)
HINFP_HUMAN.H11MO.0.C 		0.763 0.970
HINFP
M10262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIZF_01 		0.763 0.970
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000005843 C2H2 ZF 167 189
ENSCPOP00000005843 C2H2 ZF 196 216
ENSCPOP00000005843 C2H2 ZF 225 247
ENSCPOP00000005843 C2H2 ZF 251 274
ENSCPOP00000005843 C2H2 ZF 280 302
ENSCPOP00000005843 C2H2 ZF 341 364
ENSCPOP00000014498 C2H2 ZF 177 199
ENSCPOP00000014498 C2H2 ZF 206 226
ENSCPOP00000014498 C2H2 ZF 235 257
ENSCPOP00000014498 C2H2 ZF 261 284
ENSCPOP00000014498 C2H2 ZF 290 312
ENSCPOP00000014498 C2H2 ZF 351 374

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HINFP Equus caballus ENSECAG00000024938 I 0.808
HINFP Procavia capensis ENSPCAG00000013133 I 0.808
ENSSTOG00000014457 Ictidomys tridecemlineatus ENSSTOG00000014457 I 0.808
HINFP Loxodonta africana ENSLAFG00000017500 I 0.806
HINFP Microcebus murinus ENSMICG00000002733 I 0.801
HINFP Otolemur garnettii ENSOGAG00000007304 I 0.801
HINFP Myotis lucifugus ENSMLUG00000000455 I 0.798
HINFP Pteropus vampyrus ENSPVAG00000005598 I 0.798
Myotis_brandtii_HINFP_10033522 Myotis brandtii Myotis_brandtii_HINFP_10033522 I 0.798
ENSMEUG00000015482 Macropus eugenii ENSMEUG00000015482 I 0.796
ENSSHAG00000009681 Sarcophilus harrisii ENSSHAG00000009681 I 0.796
Aan_R014383 Calypte anna Aan_R014383 I 0.796
ENSTSYG00000012226 Tarsius syrichta ENSTSYG00000012226 I 0.791
HINFP Oryctolagus cuniculus ENSOCUG00000010808 N 0.764
HINFP Callithrix jacchus ENSCJAG00000013942 I 0.763
ENSCSAG00000002522 Chlorocebus sabaeus ENSCSAG00000002522 I 0.763
HINFP Homo sapiens ENSG00000172273 D 0.763
HINFP Gorilla gorilla ENSGGOG00000008087 I 0.763
HINFP Macaca mulatta ENSMMUG00000014877 I 0.763
ENSNLEG00000007387 Nomascus leucogenys ENSNLEG00000007387 I 0.763
ENSPANG00000005040 Papio anubis ENSPANG00000005040 I 0.763
ENSPPYG00000003957 Pongo abelii ENSPPYG00000003957 I 0.763
HINFP Pan troglodytes ENSPTRG00000004372 I 0.763
ENSP00000318085 Macaca fascicularis ENSP00000318085 I 0.763
HINFP Dasypus novemcinctus ENSDNOG00000025019 N 0.762
HINFP Tursiops truncatus ENSTTRG00000002809 I 0.759
HINFP Sus scrofa ENSSSCG00000015112 I 0.758
ENSAMEG00000000033 Ailuropoda melanoleuca ENSAMEG00000000033 I 0.756
HINFP Canis familiaris ENSCAFG00000012224 I 0.756
HINFP Felis catus ENSFCAG00000001165 I 0.756
ENSMPUG00000005286 Mustela putorius furo ENSMPUG00000005286 I 0.756