CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene21592-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene21592-v1.0-hybrid
T202572_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna21592.1-v1.0-hybrid
GRAS
164
534
LNQVLIFCAKAVADNDLLMAQWMMDELRQMVSVSGEPIQRLGAYMLEGLVARRASSGSSICKALRCKEPASSELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDKVHIIDFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEMFKVPFEFHAAAISGCDVQLENLGVRPGEALAMNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVTLPRDHKERINVEQHCLAKEVVNIIACEGIERVERHELLGKWRSRFAMAGFTPYPLSSLVNATIKTLLKNYSDKYRLQERDGALYLGWKNRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRDM6
Callithrix jacchus
ENSCJAG00000017318
I
0.000
ENSPFOG00000000918
Poecilia formosa
ENSPFOG00000000918
I
0.000
PRDM6
Procavia capensis
ENSPCAG00000007467
N
0.000
PRDM6
Taeniopygia guttata
ENSTGUG00000001115
N
0.000
Aan_R002291
Calypte anna
Aan_R002291
N
0.000
Afo_R013833
Aptenodytes forsteri
Afo_R013833
N
0.000
Cmyd_10008583
Chelonia mydas
Cmyd_10008583
N
0.000
Gfo_R011707
Geospiza fortis
Gfo_R011707
N
0.000
Tal_R005602
Tyto alba
Tal_R005602
N
0.000